| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6850 |
|---|
| Symbol | |
|---|
| ID | 8716118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | + |
|---|
| Start bp | 19356 |
|---|
| End bp | 20459 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | initiator RepB protein |
|---|
| Protein accession | YP_003391598 |
|---|
| Protein GI | 284005779 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.0436746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.135729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGC CATCAAATCC TAATCAGTCG CTCCAACTCT CTAACAACCA GCTCTCGTTA
GTTTTTGAGA GTACTACCAT AACGGCTCCT GTTGAGGTGA ATCCCGAAAC TATTGTGCTT
CGGACACCGA ACAACAAGAC AATTCTGATC AGGGAACCGC TGAAATTGCT AACCAGCACG
ACTGAATTTG GTTTCTTTGA GCGTCGTCTC TACTGGCTTG TCCTGCGTGA AATTCGTAAC
ATTCAGGCCG TCGATAAGGT GAAGATCAAG CCTTACGAGG AACTCAAATT CAGGTTTCAT
TACTCCGAGG TTATCAAGGG CCATCCCAAC TCATCCATAA AAAAGGTAGT TGAACTGATC
CAGAAGCGAA AAATCAATTG GGAGGATGAG AGCGGCAAAT ACACGAACGT GGTCGTATTT
CCGATGGCTG AGTACTGGCC AAAGAAAGGC GTGATCGAAC TGACGATGTA CCATGCTGTC
ATACCTGTCT TTCTTTATCT GGGCAGCGGA TACGCGCAAT ATGGATACGA AGATGCGCTG
ATTCTTAGCA GCGAATACGC ACAGTTGCTA TTTACCAACC TGGCTCGTTT TCGGAATACA
GGCATCTGGC GTATTGGTTT AGTCGAACTT CGGCAGCTTA TCGGTGCTCA CGAGAAATCC
TATGCAAATT ACTCAGCGTT CCGAACGCGG GTAATCGATT TGTCATTACG ACAGATCAAC
GAACATACAA ACCTAATAGT AACGTATGAA CCAGTAATGC AGGGCCGGGC CGTGGTTGGT
ATTGAATTTA GAATTCAGTC GAAAACTCCA CCCAACGAGT TGGAGAAGGA GACAAAGAAG
GCAGAGATGA AGCAACGCTT AGATGAGTTG ATGCAGTTGG ATATTGCCGA AGTCATATCC
TATGCCGGCA ATCAGTTAAG TCAGTATTAC CCTTCGTTCA CGCACCAACA GAAAAAAGCG
ATTCTCCAGA ATGGCGAACT ATTAAAAGCG TTTCTTCGCG CTAACCTCTA TGCAGAATAT
GGCTTTGCCG ACAAAGACCC TGAAGCTTAT GTAGCGCAAA GCGTTTTTAA CTATAAGAAG
AAAGGAATAG AGAAGGCTAA TTAA
|
|---|
| Protein sequence | MRKPSNPNQS LQLSNNQLSL VFESTTITAP VEVNPETIVL RTPNNKTILI REPLKLLTST
TEFGFFERRL YWLVLREIRN IQAVDKVKIK PYEELKFRFH YSEVIKGHPN SSIKKVVELI
QKRKINWEDE SGKYTNVVVF PMAEYWPKKG VIELTMYHAV IPVFLYLGSG YAQYGYEDAL
ILSSEYAQLL FTNLARFRNT GIWRIGLVEL RQLIGAHEKS YANYSAFRTR VIDLSLRQIN
EHTNLIVTYE PVMQGRAVVG IEFRIQSKTP PNELEKETKK AEMKQRLDEL MQLDIAEVIS
YAGNQLSQYY PSFTHQQKKA ILQNGELLKA FLRANLYAEY GFADKDPEAY VAQSVFNYKK
KGIEKAN
|
|---|
| |