Gene Slin_6846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6846 
Symbol 
ID8716114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp15671 
End bp16207 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID 
ProductPeptidase S24, S26A and S26B, conserved region 
Protein accessionYP_003391594 
Protein GI284005775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.391579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.145831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAC CCGATGACCG TATCCCTATT CACGACATCG TGAAAGCGAC GGTACAAACG 
ACCTTTTTTA TACCCTTTTA CTCGTACTAC GTAAATGCCG GGTTCGCGTC GCCGGCCGAA
TCGTACATCG AAAGAGCCTG CGACCTCAAC GAACTGTGCA TCGACAACGA AGAGGCTACA
TACTTTGTCC GCGTCGGTTC AGATAGTATG TCGGGCGACC GGATCGAGCG GGGTGACGTA
TTGGTGGTCG ATTGCTCGAA GGAGCCATCA GATGGAAAAA TAGTCGTTGT CTGGTACAAT
GGAGACCACG CCGTGAAACG AATTTACCAC GTCGAAAAGA TGGTCGTTCT CCTGTCGTCA
AACCCTAAAT ACGATCCGAT CTACGTGCAT CCAGGCGAAG ACTTCTCTGT GTTCGGAGTC
GTCGTACATG TCTTTTTCAA ACCTATTGCT CGACCGTCGC TGCACGATAT AGATCTGATT
AGGAATGCCA CCGTTTTAAC CCAAAAAAAC AAAGCAAAAA AGCCTTCGGT TAAGTAG
 
Protein sequence
MIAPDDRIPI HDIVKATVQT TFFIPFYSYY VNAGFASPAE SYIERACDLN ELCIDNEEAT 
YFVRVGSDSM SGDRIERGDV LVVDCSKEPS DGKIVVVWYN GDHAVKRIYH VEKMVVLLSS
NPKYDPIYVH PGEDFSVFGV VVHVFFKPIA RPSLHDIDLI RNATVLTQKN KAKKPSVK