Gene Slin_6840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6840 
Symbol 
ID8716108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp10472 
End bp10996 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391588 
Protein GI284005769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.117042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value0.127013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGAG AAACTGTGAA GATTGACGCG GAGGTGGCTC AACGCGCCCG CGATCAGGTC 
AAAAAATTAA ATCAGAAGTT GGCCCGAAAA AAAGGGCCGG GTAAACCTCA AAAAATTACG
TTCAACGAGT ACCTCAGCAG GGCCGTTGAC CACTACATCG AGTTGGGATA TGACCCCAGC
CGGGAGGATG ACAAGAACCC ATTGAAGGAA ACCGTCGTCC GCACCACCGA CCGGATCATC
ACTTATCTGC AAAGCCACGA GAAGTGGTAC ATGGAACCGG TTAGACAGCA TCTTGAAAAA
GTAGATGCTC GTCTGGAACA GTCGGAGTTG CCCGGTGCCG CAGAGCCACC GACTGATCTA
AAATTTATCA AAGAGATGAG TTTGTTCAGT TACCTGACGA GTGACCTGGT GCTGAACCTT
CTGTTTCATC AGTACCGCGA TGCCCCCGAC GATTTAGCCG AAATTCAGAC GTGGGCAGCT
AAACGGTATC AGGAGCGGTA CGACGAATTG ATGCAGAAAT ATTGA
 
Protein sequence
MERETVKIDA EVAQRARDQV KKLNQKLARK KGPGKPQKIT FNEYLSRAVD HYIELGYDPS 
REDDKNPLKE TVVRTTDRII TYLQSHEKWY MEPVRQHLEK VDARLEQSEL PGAAEPPTDL
KFIKEMSLFS YLTSDLVLNL LFHQYRDAPD DLAEIQTWAA KRYQERYDEL MQKY