Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6832 |
Symbol | |
ID | 8716100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 3042 |
End bp | 3815 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | protein of unknown function DUF955 |
Protein accession | YP_003391580 |
Protein GI | 284005761 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00000166978 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.022054 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAAC GTCGAGACCC AAGATCAGCC GCCCGAAAGA TTTTAACAAA ACTCAATGTC AGTGATTTAA CGGGCCTTTC TCTGAAAGAT GTTGTCCAAA ATTTCGGGCC TTATGTTAAA GAAGACCCTA TGGTGGGCGC ACAAGGACGA ATTTTATTTA TAGGCTCACT CGCTCTGATT ACAATTAACG CCAACATCCA ACATTACGGC CAATCAAGAT TTGTACTGGC GCACGAGTTT GGTCATGCTG AGTTACATGC TGGAATAAAG CCATTATTTA ATTGCGATGC AGATTCTTTC AAGCAATGGC TTAAGAAAGG AGAGCAAGAA CAAGAGGCAA ATGAATTCGC GGCAGAACTT CTAATGCCAT CAAAAATATT TGCTGGCGAG TGTATTGGGC AGGAATTCTC GCTTGATTTA ATCGCACATT TAGCGGATCG TTTTCAAACG AGTCAGACAG CCACCGCTTT ACGAATTGTT GAGCAAGGTT CTTTTCCAAT CGCCATTGTT TACTCCGAAA ATAAGAAAGT TAAGTGGTTC GCAAAAAATC GCTCGTTTCC ACTCGGACAC GTAGTGATTG GATCAGATAC GCCACCAGAA TCAGCCTCCC GACACTGGTT TAACACTGGT ATTTCAAAAC AAAAGGTTTT AGATTCTTGG ACTTGGTTCT TCAATGATTA TAATCAACAA AATTTCAGCC GACAACGAGT TCGAGAATTT ATCTTGCCGC TACCACGATA CAGCGGGGTT TTAAGTTTCC TCCGCTTAGA ATAA
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Protein sequence | MMQRRDPRSA ARKILTKLNV SDLTGLSLKD VVQNFGPYVK EDPMVGAQGR ILFIGSLALI TINANIQHYG QSRFVLAHEF GHAELHAGIK PLFNCDADSF KQWLKKGEQE QEANEFAAEL LMPSKIFAGE CIGQEFSLDL IAHLADRFQT SQTATALRIV EQGSFPIAIV YSENKKVKWF AKNRSFPLGH VVIGSDTPPE SASRHWFNTG ISKQKVLDSW TWFFNDYNQQ NFSRQRVREF ILPLPRYSGV LSFLRLE
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