Gene Slin_6832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6832 
Symbol 
ID8716100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp3042 
End bp3815 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content42% 
IMG OID 
Productprotein of unknown function DUF955 
Protein accessionYP_003391580 
Protein GI284005761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000166978 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.022054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAC GTCGAGACCC AAGATCAGCC GCCCGAAAGA TTTTAACAAA ACTCAATGTC 
AGTGATTTAA CGGGCCTTTC TCTGAAAGAT GTTGTCCAAA ATTTCGGGCC TTATGTTAAA
GAAGACCCTA TGGTGGGCGC ACAAGGACGA ATTTTATTTA TAGGCTCACT CGCTCTGATT
ACAATTAACG CCAACATCCA ACATTACGGC CAATCAAGAT TTGTACTGGC GCACGAGTTT
GGTCATGCTG AGTTACATGC TGGAATAAAG CCATTATTTA ATTGCGATGC AGATTCTTTC
AAGCAATGGC TTAAGAAAGG AGAGCAAGAA CAAGAGGCAA ATGAATTCGC GGCAGAACTT
CTAATGCCAT CAAAAATATT TGCTGGCGAG TGTATTGGGC AGGAATTCTC GCTTGATTTA
ATCGCACATT TAGCGGATCG TTTTCAAACG AGTCAGACAG CCACCGCTTT ACGAATTGTT
GAGCAAGGTT CTTTTCCAAT CGCCATTGTT TACTCCGAAA ATAAGAAAGT TAAGTGGTTC
GCAAAAAATC GCTCGTTTCC ACTCGGACAC GTAGTGATTG GATCAGATAC GCCACCAGAA
TCAGCCTCCC GACACTGGTT TAACACTGGT ATTTCAAAAC AAAAGGTTTT AGATTCTTGG
ACTTGGTTCT TCAATGATTA TAATCAACAA AATTTCAGCC GACAACGAGT TCGAGAATTT
ATCTTGCCGC TACCACGATA CAGCGGGGTT TTAAGTTTCC TCCGCTTAGA ATAA
 
Protein sequence
MMQRRDPRSA ARKILTKLNV SDLTGLSLKD VVQNFGPYVK EDPMVGAQGR ILFIGSLALI 
TINANIQHYG QSRFVLAHEF GHAELHAGIK PLFNCDADSF KQWLKKGEQE QEANEFAAEL
LMPSKIFAGE CIGQEFSLDL IAHLADRFQT SQTATALRIV EQGSFPIAIV YSENKKVKWF
AKNRSFPLGH VVIGSDTPPE SASRHWFNTG ISKQKVLDSW TWFFNDYNQQ NFSRQRVREF
ILPLPRYSGV LSFLRLE