| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6829 |
|---|
| Symbol | |
|---|
| ID | 8716097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013732 |
|---|
| Strand | - |
|---|
| Start bp | 1031 |
|---|
| End bp | 1732 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391577 |
|---|
| Protein GI | 284005758 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.000000439068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.0515787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTT ATCCAACGCT CATCCTTTCA ATGTCAGACA GCCAAAGCAA TCGGGGAAAC
GATGTAGGAC GCATCACCCC CCTCGCCATC ACCTTCCAGA CTAAGAAGTT TACATGGCTC
CAGCAGTACG CCACTGGTGC AGAATTGAAA AAACTATTCG GTCTGAAACC AGAACAGGAG
CTCTACCAGT CGCTTATCGA TCCGTGGGAT GATGTACTCG TTGCCAACGA CGAAAGCATA
AACCTCGCCC GGCCAGGTGC TGAGCGGTTC TTTATCCGGC AACCGCTTGA ATTTCAACTG
GATGATCAGA AACTTGCTTG GGATAAACCA TTCATAACAG GTCTTGAACT CCGTAAAGTC
GGGAGAGTTG AGGAGGGAGA TGAAATTTGG CTATCTGTCG CACGGCCCTA CAAAGACGAG
CTGATTACCG ATTCAAAGCG AGTTGACTTG ACGCCGGATG GTATAGAAAA GTTCTTCGTT
GTGAAACTGG AGGTCGTTAT CCGCATCAAT AACGTAGAGC ATAAGATTAG GCGGGGTACG
TACACGGTGA CCCAGCTTAA GAAGATCGGC AATGTGAAAG CGTCCGATGA AATGGATGCA
CTGGAAGGGC ATAAGCTGAC CCCACTCGAC GATGCGGCCA CGGTCGTTAT CAAAGGCGAT
GAGCAGTTCA TTTCGCACGT CCGGGACGGT TCTTCTGCTT AG
|
|---|
| Protein sequence | MSGYPTLILS MSDSQSNRGN DVGRITPLAI TFQTKKFTWL QQYATGAELK KLFGLKPEQE
LYQSLIDPWD DVLVANDESI NLARPGAERF FIRQPLEFQL DDQKLAWDKP FITGLELRKV
GRVEEGDEIW LSVARPYKDE LITDSKRVDL TPDGIEKFFV VKLEVVIRIN NVEHKIRRGT
YTVTQLKKIG NVKASDEMDA LEGHKLTPLD DAATVVIKGD EQFISHVRDG SSA
|
|---|
| |