Gene Slin_6827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6827 
Symbol 
ID8716242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp144 
End bp335 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391575 
Protein GI284005756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00000145317 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0406396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCA TGCCCGATCA ATTGCCCACT CAGCCCGATC AATCGGTGAT TCAAAAACAG 
CGCGTGGAGG ACGCCACAGA TTTTCTAAGT ATCTGTGATC GCCTGTCTAC GGGTTATGAC
AGTGGGTACT ACTGGGAAGA CATCCAACGA GCCTTACGGA TTGCAGCTGG CTTAGAGAAG
TGGCCTGGCT AA
 
Protein sequence
MEAMPDQLPT QPDQSVIQKQ RVEDATDFLS ICDRLSTGYD SGYYWEDIQR ALRIAAGLEK 
WPG