| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6824 |
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| Symbol | |
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| ID | 8716083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013731 |
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| Strand | + |
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| Start bp | 185534 |
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| End bp | 187417 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003391572 |
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| Protein GI | 284005752 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGAC GATGGCTGTA TGGATCGGCG GGGCTATTGA TACTGCTCAA TGCTTCCTGC
AAATCAGGAG GTACGTCCTC GACTAAAGCG GATGATTCGA CGCAAATTGC CGCCAGCGAC
CATGATCATT CGGGACATAA TCACGGCCCT GACGGGGAGG CAGGTACAAC CTATACCTGC
CCTATGCACC CACAGATTGT GCAGTCAGCA CCGGGTACGT GTCCTATTTG TAGCATGGAC
CTGGTAGCTG TCGGTAAAAC GGGTACAAAA GCCGGTGAGC GGTCCGACGC ATCGGTTATG
CTTAGCGCCA GTCAGATGCA GTTGGCCAAT ATAACGGTGC AACCGGTATC ATCGGGCAGC
ATCGGTAACA GCACCGTCCT GAACGCCCGG TTAGCGGCCG ATCAGCAGCA AACGGATGTC
ATCAGCAGCC GGGTGGCTGG CCGAATTGAG CGGCTGTACG TAAAGGAAAC CGGCCAGACC
ATCCGTAAGG GTCAGGTACT GTACGAAATC TACAGCGAAC CGCTGCTTAC CCAGCAGCAG
GAATATTTAA TCGCGCTGCA ACAGGAGCAG GAAATGGGCA ACGGCGAAGC GTCGAACGCA
TCCCCCCGGT ATAGTCAGTT TCGCCAGGCC GCCGAGCAGA AGCTTCGGCT CTACGGCATG
ACCGCTGAAC AGATTGCCGT ACTAGGCCGA ACCAGGAAGG TACTGCCCCG TATTCCGTTC
GTGGCTCCGG CAGGGGGTAC GGTTACCGAG ATTGCGGCTA GTGAAGGGCA ATACGTCGGT
GAAGGGGCCT TGCTCTACCG GCTGGTTAAT CTCGGCCAGC TTTGGGTCGA GGCTGAGTTA
TACGCCGGTG AAGCGAAGTT CGTGAAAGTT GGCGACCGGG TATCCGTGCA GGTAATAGGA
TACGAAGGGG ATCTGACAGC ACGGGTTGCG TTCATCAACC CTGAATACCA GGCGGGTAGT
CAGGTACTCA TTATGCGGGC CGTCCTGGCC AATCCGGGCG GGCGGTATCA ACCCGGCCAA
CAGGCTCAGG TGCTGCTCCG GCATGGGGTA CAGCGCGGGC TGACGCTGCC CGTTGATGCG
GTCGTGCGGG GGGGAGAGGG CGCGGTCGTG TTTGTGCAGA CCGGGCCGGG TTCGTTCCAG
CCGCGTCGTG TTCAAACCGG CACGGAAACC GATCAGCGGG TGGTCATCAC CAGCGGACTA
AACGGCGAGG AGACCATAGC CATGTCAGGG GCCTACCTGC TCTATAGTGA GTTGATTCTT
AAAAAAGGGG TGAATCCGTT TACCAAACAG GCAGACGAAG CGGGCGTTAA ATCGACACCA
AACGCCGAGA CTAATCCAGC ACCGATTGCC AGCCGCCAGG CGGGATCAAC CCCTGTCAGC
CAGTCCGGGG AGCCGGTACC AGAACTCTCA TCTGGCAAAC CAACGGGTAG TGGTGCACCG
GACGCCTTCA AAAAGCAGTT AACGGGTGTG TATGAAGCCT CGTTAAAATT GACTGAATCG
TTGATAGGCT CTAATAGTGG TGGCACAAAA GTTGCGGCAA CCGGGGTCGA AAAGGCCCTT
TCCCGGGTGG ACATGAAGCA GATATCCGGT CAGGCTCATA CCGACTGGAT GAAGAATTTC
AATTCGATGA ATGCTGCGCT GAAAACGATT CGCAGTACGG GCGATCTGGA CAAGCAACGC
ACGGCCTACG CTCAGTTTGA GGATGGTTTG TACCGAAGCG TGAAGGCGTT TGGCATTATG
GATAAACCAG TGTACCGTCA ATACTGCCCG ATGGCTCTCA ATAACAAGGG CAGTTACTGG
CTCAGCGACA AAAAGCCTAT CCGCAACCCC TTTTTCGGCG ATCAGATGCT GACCTGCGGA
GAAACGAAGG AAGAAATCAA TTGA
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| Protein sequence | MIRRWLYGSA GLLILLNASC KSGGTSSTKA DDSTQIAASD HDHSGHNHGP DGEAGTTYTC
PMHPQIVQSA PGTCPICSMD LVAVGKTGTK AGERSDASVM LSASQMQLAN ITVQPVSSGS
IGNSTVLNAR LAADQQQTDV ISSRVAGRIE RLYVKETGQT IRKGQVLYEI YSEPLLTQQQ
EYLIALQQEQ EMGNGEASNA SPRYSQFRQA AEQKLRLYGM TAEQIAVLGR TRKVLPRIPF
VAPAGGTVTE IAASEGQYVG EGALLYRLVN LGQLWVEAEL YAGEAKFVKV GDRVSVQVIG
YEGDLTARVA FINPEYQAGS QVLIMRAVLA NPGGRYQPGQ QAQVLLRHGV QRGLTLPVDA
VVRGGEGAVV FVQTGPGSFQ PRRVQTGTET DQRVVITSGL NGEETIAMSG AYLLYSELIL
KKGVNPFTKQ ADEAGVKSTP NAETNPAPIA SRQAGSTPVS QSGEPVPELS SGKPTGSGAP
DAFKKQLTGV YEASLKLTES LIGSNSGGTK VAATGVEKAL SRVDMKQISG QAHTDWMKNF
NSMNAALKTI RSTGDLDKQR TAYAQFEDGL YRSVKAFGIM DKPVYRQYCP MALNNKGSYW
LSDKKPIRNP FFGDQMLTCG ETKEEIN
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