Gene Slin_6819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6819 
Symbol 
ID8716079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp178306 
End bp178872 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003391568 
Protein GI284005748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.632991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAC AGGAACTCTA TATTAAAAAC ATGGTATGCG ACCGCTGTAT CTGGGTCGTG 
CGCACCGAAT TGGAACGATT GGGCTATTCG GTCACGCAGG TCGAGTTGGG GCGGGTTCTA
CTGGAAGAGT CTTCTGCTGA TCTGACGACG ATTACCGCCA TGCTGGAGCG GCATGGGTTT
GCTTTATTGA CTGATAAAAC GACCCGCGTG GTTAACCAGG TCAAAACCCT GATTATTGAA
CTGATCCAAA GCGGGCACAT CGCTGGGTTA CGAACGACGT TGTCTGATTA TTTAGCCGAC
CATGTTGGTT TGGACTACGC GCACCTGAGC CATCTGTTTT CCACAACGGA GAATTTGACT
ATCGAAAAGT TCTGGATACT TCAGCGGGTC GAGCGGGCCA AAGAATTGTT GAGCTACAAC
GAAATTCCCA TCAGCGACAT CGCCAAACGC TTGGGCTATA GCAGTGTGGC TTATCTGACG
AATCAATTCA AGCAGGTAAC CGGACTGACA CCCGCTGCTT ACCGGAATCA GCATACAACC
GACCGAAACC CACTAGATTG GATATAA
 
Protein sequence
MALQELYIKN MVCDRCIWVV RTELERLGYS VTQVELGRVL LEESSADLTT ITAMLERHGF 
ALLTDKTTRV VNQVKTLIIE LIQSGHIAGL RTTLSDYLAD HVGLDYAHLS HLFSTTENLT
IEKFWILQRV ERAKELLSYN EIPISDIAKR LGYSSVAYLT NQFKQVTGLT PAAYRNQHTT
DRNPLDWI