Gene Slin_6806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6806 
Symbol 
ID8716066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp167497 
End bp168885 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content43% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391555 
Protein GI284005735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTAG TCTACCGGCT GCTAATGATG CAAGTGATAA GATGTTGTTC GCTGCTGCTG 
GTTTTGGTCA ATGCCTCCCC TAGCTTTAGT CAGAACATAC CCGTACTCAA GTCCCATACA
TATAACATTT CGATACGAGA TGGCGATGAT TTCAGAAAAG GTCGCTGGAA TATAGACCCA
AAAGTAAACC CCGACGTCTA CGAAGCGCCA ATGGCCATTA ACCAGAAGCA TAAGCTGGTC
ACCTTCATTA CCGATGTGGA TTCGCTTCAA TTGAGCGTGG AGATGGGCAA AACATATTCT
TTTGTCATTA TAGTGAATGA CAAAGATAGT GCCTTCACCC AAGTGAAAAC GGTCCAGTCA
GCCGTTAATT TCTCCAGCGA GTACATCAAA TCGCACCAAG GAAAAACGCT TGTTGAAATA
CCCGCCGTGT ATGAATTGGT TAATATCATT ATTGCCTTGA CCAATACCGG TAAAAGTAAG
ACGGGACTAG TGGTTAAAAA TACGGCTTAC TACCAAGCCG TACTCAACTG GTTTAGCCAC
TATGATCAAG AGCCGGTTGT GAAAAAACTA GATTCGATTT TGTCAGGTAG CTATGTCGAG
TATTTTTCGA TTAAGATGAA TGCCTACTCG TTTAGATTTA ACGCTAAGGG AAAAATTGTA
CCCAGTGAGG TTTACAACAG GCTCACGAGT GTGAACACCC TCAAGCCATT TCTTGCCGAC
TTACAGCACT TCGCTGACCA ATCTAAGTTC GGGCTGTTCT TCAAACAACA TCAGTCTCTC
TATAACCAAC TCATACGAGC CTATAGGGAT TCAATCGGAG TACTGGAAAT GCAAACCTGG
CTGGGAAAGA ACTTTCCGCA GACAACATAC AATTCGTATA AAATTGTGTT TTCCCCGCTG
GTGGGGAATA ATCAGTCGGC CAATTGGTTT GAGTACAATG GCTTTAAAGA AGTACAAGCC
CATGTGAACT TCCCTTATCG AAACGAGGTA GAGAAAAAGG AGTTTTCCCC TGAAGCCCTT
CATGTTAAAG ACGGCAATAT TGTGTTTACC GAATTGAATC ACAATTTCAT TGGTCCGGAA
GGCCAAAAGC TGGAATACCA AAACAAGCTC AATGCTGCTT TTGTAAACTT AACTACCTGG
ATAAGACAAG GTTCCCCCGC TGAGAAGGCC TACAATAAAG CCCGTGCTTG TTTTGATGAA
TACATGAACT GGGCTCTGGT AAGCCTAAGG TATGTAGACT ATGCCCCGCC TTTAGAGCAG
GCGAAGCTCA TCGCCAAAAT GGAAAAATTC CAAGTAGAGG TCAGAGGATT TAAAAAGTTT
GGGGAGTTTG ACCAGTTTCT TGTTGAGTGT GTATTTCGGA GTAAACTGAC CCACCTGTTT
CGGATGTAG
 
Protein sequence
MRLVYRLLMM QVIRCCSLLL VLVNASPSFS QNIPVLKSHT YNISIRDGDD FRKGRWNIDP 
KVNPDVYEAP MAINQKHKLV TFITDVDSLQ LSVEMGKTYS FVIIVNDKDS AFTQVKTVQS
AVNFSSEYIK SHQGKTLVEI PAVYELVNII IALTNTGKSK TGLVVKNTAY YQAVLNWFSH
YDQEPVVKKL DSILSGSYVE YFSIKMNAYS FRFNAKGKIV PSEVYNRLTS VNTLKPFLAD
LQHFADQSKF GLFFKQHQSL YNQLIRAYRD SIGVLEMQTW LGKNFPQTTY NSYKIVFSPL
VGNNQSANWF EYNGFKEVQA HVNFPYRNEV EKKEFSPEAL HVKDGNIVFT ELNHNFIGPE
GQKLEYQNKL NAAFVNLTTW IRQGSPAEKA YNKARACFDE YMNWALVSLR YVDYAPPLEQ
AKLIAKMEKF QVEVRGFKKF GEFDQFLVEC VFRSKLTHLF RM