Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6782 |
Symbol | |
ID | 8716044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | + |
Start bp | 148481 |
End bp | 149398 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_003391533 |
Protein GI | 284005713 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.337377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.84699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCCCG CAACCCCTAC CCAACCGGCA CCGGCTTCCG CAGCCGGTCG TTTCAACAAA AATCTGCGCA TCGTCTTTGG CCTGACGTTC ACGTATTTTT TAGTCGAGGT AGTCGTTGGC TACATCACCA ACAGCCTGGC CCTGCTCTCC GACGCGGCTC ACATGCTCAC CGACGTGATC GGGCTGGCCC TGGCCCTGTT TGCCAACTGG ATGAGCCGCC GACCCATCAC GGCCCGGCGC AGCTACGGCT TCTATCGGCT GGAAATCCTG TCGGCCTTCG TCAACGCGCT GATTCTGATT GGCATCTCCC TGTATATTCT CTACGAAGCC TACGGCCGGT TTCGCAATCC GCCGGTGGTC GACAGCCGTA ATATGACGCT GGTCGCCCTA GTGGGCTTAG CCGTCAATCT GCTGGGTATC TACCTGCTTC GGCGGGGCGC CAAAGACAGT TTGAATGTCA AGGGGGCTTA CTTAGAAGTG GTGAGTGATC TGCTCAGTTC GGTGGGGGTC ATCATTGCCG GACTCGTGAT GACTTATACC GGCTGGTACT ACGCCGATCC GCTGTTCAGT GCCATCATTG GCCTGTTCAT TCTGCCGCGC ACGCTGTCGC TGATGATGGA ATCGGTCAAC ATCCTGCTTC AGGCAACGCC CGATGGCCTG GACGTAACCG ACCTGGAGCA GACCATCAAC GCGGTGCCGG GCCTTAGCAG CGCGCACGAC CTGCACATCT GGACGCTCAC CTCGGGTATT GTGGTGATGA GTGGTCACGT AGTAGCCGAT GCTTCGCTGA CGACCGAGGA ACTGACGGGC CGCATCGGGG AGGTGGCCGG TCGGCTGACG ACCCAGTACA ACATTCAGCA CATTGCGCTC CAGCCCGAGC GGGCGGGCCA ATGCACCAAC GCCCTGACCA CCTTATAA
|
Protein sequence | MTPATPTQPA PASAAGRFNK NLRIVFGLTF TYFLVEVVVG YITNSLALLS DAAHMLTDVI GLALALFANW MSRRPITARR SYGFYRLEIL SAFVNALILI GISLYILYEA YGRFRNPPVV DSRNMTLVAL VGLAVNLLGI YLLRRGAKDS LNVKGAYLEV VSDLLSSVGV IIAGLVMTYT GWYYADPLFS AIIGLFILPR TLSLMMESVN ILLQATPDGL DVTDLEQTIN AVPGLSSAHD LHIWTLTSGI VVMSGHVVAD ASLTTEELTG RIGEVAGRLT TQYNIQHIAL QPERAGQCTN ALTTL
|
| |