Gene Slin_6782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6782 
Symbol 
ID8716044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp148481 
End bp149398 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content59% 
IMG OID 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003391533 
Protein GI284005713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.337377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.84699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCCG CAACCCCTAC CCAACCGGCA CCGGCTTCCG CAGCCGGTCG TTTCAACAAA 
AATCTGCGCA TCGTCTTTGG CCTGACGTTC ACGTATTTTT TAGTCGAGGT AGTCGTTGGC
TACATCACCA ACAGCCTGGC CCTGCTCTCC GACGCGGCTC ACATGCTCAC CGACGTGATC
GGGCTGGCCC TGGCCCTGTT TGCCAACTGG ATGAGCCGCC GACCCATCAC GGCCCGGCGC
AGCTACGGCT TCTATCGGCT GGAAATCCTG TCGGCCTTCG TCAACGCGCT GATTCTGATT
GGCATCTCCC TGTATATTCT CTACGAAGCC TACGGCCGGT TTCGCAATCC GCCGGTGGTC
GACAGCCGTA ATATGACGCT GGTCGCCCTA GTGGGCTTAG CCGTCAATCT GCTGGGTATC
TACCTGCTTC GGCGGGGCGC CAAAGACAGT TTGAATGTCA AGGGGGCTTA CTTAGAAGTG
GTGAGTGATC TGCTCAGTTC GGTGGGGGTC ATCATTGCCG GACTCGTGAT GACTTATACC
GGCTGGTACT ACGCCGATCC GCTGTTCAGT GCCATCATTG GCCTGTTCAT TCTGCCGCGC
ACGCTGTCGC TGATGATGGA ATCGGTCAAC ATCCTGCTTC AGGCAACGCC CGATGGCCTG
GACGTAACCG ACCTGGAGCA GACCATCAAC GCGGTGCCGG GCCTTAGCAG CGCGCACGAC
CTGCACATCT GGACGCTCAC CTCGGGTATT GTGGTGATGA GTGGTCACGT AGTAGCCGAT
GCTTCGCTGA CGACCGAGGA ACTGACGGGC CGCATCGGGG AGGTGGCCGG TCGGCTGACG
ACCCAGTACA ACATTCAGCA CATTGCGCTC CAGCCCGAGC GGGCGGGCCA ATGCACCAAC
GCCCTGACCA CCTTATAA
 
Protein sequence
MTPATPTQPA PASAAGRFNK NLRIVFGLTF TYFLVEVVVG YITNSLALLS DAAHMLTDVI 
GLALALFANW MSRRPITARR SYGFYRLEIL SAFVNALILI GISLYILYEA YGRFRNPPVV
DSRNMTLVAL VGLAVNLLGI YLLRRGAKDS LNVKGAYLEV VSDLLSSVGV IIAGLVMTYT
GWYYADPLFS AIIGLFILPR TLSLMMESVN ILLQATPDGL DVTDLEQTIN AVPGLSSAHD
LHIWTLTSGI VVMSGHVVAD ASLTTEELTG RIGEVAGRLT TQYNIQHIAL QPERAGQCTN
ALTTL