Gene Slin_6781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6781 
Symbol 
ID8716043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp147843 
End bp148484 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID 
Productphosphoheptose isomerase 
Protein accessionYP_003391532 
Protein GI284005712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.375812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.778027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCC TGCAATCGCT GATCTATACT GAATTAACCG GGGCTCAAAC TGAACTCAGC 
ACGTTCATGG ACAACCCGGC CAATCTGGCG GCCGTCGAAG CAGCCGCCCG TCTCATGGCG
GACGCGCTTA GAGGGGGCCA TAAAATTATA TCCTGCGGCA ACGGCGGCTC CCATTGCGAT
GCCATGCACT TTGCCGAAGA ACTGTCGGGC CGCTACCGCA ACGACCGCCC GGCCTTAGCT
GGGTTAGCCA TTTCGGACAG CAGCCATCTG TCGTGTGTGG GCAATGATTA CGGCTACGAG
TTTGTGTTTT CCCGCTTTAT TGAAGGTCTG GGCCAGTCGG GCGATGTGCT GCTGGGCATC
AGTACCAGTG GCAACTCGGC CAACGTGATA CGGGCGGTAG ACGCGGCCCG CCAGAAGCGA
ATGGCAGTCG TACTGCTGAC GGGCAACGAC GGTGGTCAAC TGGCGGGTCG GGCTGATGTA
GAAATTCGCG TGCCCCATTT CAGCTATGCG GACCGGATTC AGGAAATACA CGGCATGGTC
ATTCACATCC TGATTCTGCT GATTGAAACG CTGATGGCCG CCCCGGTAGA GACTATTGAT
TACCAAGCCG ATCAATTAAT AAAACCGTCC ATTATCGCAT GA
 
Protein sequence
MQTLQSLIYT ELTGAQTELS TFMDNPANLA AVEAAARLMA DALRGGHKII SCGNGGSHCD 
AMHFAEELSG RYRNDRPALA GLAISDSSHL SCVGNDYGYE FVFSRFIEGL GQSGDVLLGI
STSGNSANVI RAVDAARQKR MAVVLLTGND GGQLAGRADV EIRVPHFSYA DRIQEIHGMV
IHILILLIET LMAAPVETID YQADQLIKPS IIA