| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6780 |
|---|
| Symbol | |
|---|
| ID | 8716042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013731 |
|---|
| Strand | + |
|---|
| Start bp | 147163 |
|---|
| End bp | 147816 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1345 |
|---|
| Protein accession | YP_003391531 |
|---|
| Protein GI | 284005711 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.269474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG AAAATACGTA TCTGCCGAGA CTATCGGCTT TATCCCGGTC ATTGATCGCC
CTGGGCGTTG GTACGCTGGT TTGGCTGGTA ACGGTCGGGT GGGTTGGCTG GCAGACCCGT
CTCCTGCTGG CCTGGCTGGG GTATACACTA ACCGTGCTGA TGCTCATTTG GCTGATCATC
GGCCAGGCGG ATGCCTGCCG GGTGGCTCAA CGGGAGGACG AGAGCCGCCC GGCCATCTTT
CTGCTAACCG TTGGCGGAGC GCTGGCGAGT CTGCTGGCCG TTGTGGTGCT GCTGGGATCG
GTGAAAGGCC TGTCGGGGCC GGAAGCCACG CGGCACGTTC TGCTGTCGGG CCTGACGGTC
GTTAGTTCGT GGGTGTTGAT GCACAGCACG TTCACGCTGC ACTACGCCCA CCTGTATTAC
GACCCGGATG AGACCGCGCA GGTCGGCGGG CTGGATTTTC CCGGCGATGA GCAGCCCGAC
TACCTCGATT TTGCGTACTA TTCCTTTGTA GTCGGCATGA CCTTTCAGGT GTCGGATGTA
GCGGTTAAGG CCAAACCGAT TCGTCGGCTG ACGCTGCTGC ACGGCGTCTT GTCCTTTGCG
TTTAATACGC TCATCATCGC CCTGACGATT AACACCGTTG CCAGTCTGTT ATAA
|
|---|
| Protein sequence | MKKENTYLPR LSALSRSLIA LGVGTLVWLV TVGWVGWQTR LLLAWLGYTL TVLMLIWLII
GQADACRVAQ REDESRPAIF LLTVGGALAS LLAVVVLLGS VKGLSGPEAT RHVLLSGLTV
VSSWVLMHST FTLHYAHLYY DPDETAQVGG LDFPGDEQPD YLDFAYYSFV VGMTFQVSDV
AVKAKPIRRL TLLHGVLSFA FNTLIIALTI NTVASLL
|
|---|
| |