Gene Slin_6737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6737 
Symbol 
ID8716003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp98911 
End bp100176 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content50% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003391492 
Protein GI284005672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.978688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.372172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC TTCACAAGAC GACGCTCTAC CTGCTCCTGG CGGCCTTCCC CATCGCACTG 
GGGGGTGTTT TTCTATTGAA TGCGTATATC CACCGGTATA TGCTGTATGA AATCGACGAG
TTACTGGCCA GTGAACTCGT CCAGGTAAAA GCACGGCTTC GCCAGCACCC GCCCCATGCC
ACCAACATGC CGTACTGGGA TCCAACCATA CGGATTACCC GGACTACCCC CCTTCGTCCA
GTATCCCCCG TTTACATAGA CACCATAGCC TTCGACCCCG TCGAAAAAGA ACAGGTTCCG
GTTCGTATGC TTCGCGCTGG GTATTCCATT GGTGGTCAGC AGTACACGAT AAGCCTTATG
CAATCCTACC TGGAGTTTGA CGAAATCGCC AGTGCGGTAT CTGTAGGGGT CATTGTTTGT
TTTCTGCTCG TTGTGACACT GCTGGTGCTG GCCGATGTTG TGGTGACCCG GCGGATCTGG
CAGCCCTTTT ACGGGATCAT TCATCACTTG GAGCAGTTTC GAGTCGATGG CCCGAATGAA
GTATCCTTCC CCGTCAGTGA TGTAGCGGAA TTTAAATTGC TCAGTCAGTC ACTCGATGAA
ATGAGTCGCC GTACTCGCCA ACAATACGCC CAGCAAAAGC AATTTACCGA TAATGCCTCG
CACGAAATGC AGACACCCTT AAGTGTGCTA TCGGTCGAAT TAGATTTACT GCAACAGTCG
GAAGGGCTAA ACGAAGCCGA CCTGGATCGG ATTCACCGGT CACAGCAGGA GATAAAACGG
CTCTCCGCCA TGAATCAATC TTTGCTGTTG CTGGCCAAGA TAGATAATCA TCAGTTTGCC
CAACAGGATT TGGTGAATAT TGGGGAACTG GTCAATCAAC TTCTGGATAA CTATTTAGAT
TATGTGGCCC ACAAAGGCAT AACGGTTAAC CGGATGATTG AAAAAGGCCC AACCCGACTT
ATGAACCGGC AGCTAGCCGA CGTATTATTT TTAAATCTGA TCAAAAACGC CGTCCGCCAT
GCGGACTCAG GCAGTTCAAT TGTCGTGCAG GTGGGCGCGA TAAGTTTTAG TATTACCAAT
GAAGGGGATC CGCTGCCGTT TCCTGAGGAG CAACTGTTTC GGCGGTTTGT CCGCAATCAG
GCGCTGCTTC AGTCCACTGG TCTGGGCTTA GCCTTAGTGA AGGAAATTGC CGACCAGTAT
GGCATGAGGG TGACCTATAC TTATGTTTCA TCGATCCGTC GGCACTTGTT TCAGGTTGAT
TTTTGA
 
Protein sequence
MKLLHKTTLY LLLAAFPIAL GGVFLLNAYI HRYMLYEIDE LLASELVQVK ARLRQHPPHA 
TNMPYWDPTI RITRTTPLRP VSPVYIDTIA FDPVEKEQVP VRMLRAGYSI GGQQYTISLM
QSYLEFDEIA SAVSVGVIVC FLLVVTLLVL ADVVVTRRIW QPFYGIIHHL EQFRVDGPNE
VSFPVSDVAE FKLLSQSLDE MSRRTRQQYA QQKQFTDNAS HEMQTPLSVL SVELDLLQQS
EGLNEADLDR IHRSQQEIKR LSAMNQSLLL LAKIDNHQFA QQDLVNIGEL VNQLLDNYLD
YVAHKGITVN RMIEKGPTRL MNRQLADVLF LNLIKNAVRH ADSGSSIVVQ VGAISFSITN
EGDPLPFPEE QLFRRFVRNQ ALLQSTGLGL ALVKEIADQY GMRVTYTYVS SIRRHLFQVD
F