| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6728 |
|---|
| Symbol | |
|---|
| ID | 8715994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013731 |
|---|
| Strand | + |
|---|
| Start bp | 89297 |
|---|
| End bp | 89689 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | Endoribonuclease L-PSP |
|---|
| Protein accession | YP_003391483 |
|---|
| Protein GI | 284005663 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.371107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA ACATAACCGA TCCCTGGGCA TGGGGTAAAT ACACCAATTC AGTTCAGGCA
GTCGAAATTA AGCAGCCACT GGGAACTCTT TACTGTTCCG GGCAAGTCGC CATTGATACC
AACGGCCAGC CGGTTAATGC CGACATGAAT ACGCAATTAG AGTTGACTTT TCAGAATTTG
GAGCAACTCA TTAGCGAGGC CGGATATGAG CCGAGTGGCA TTGTCAGGCT GAATGTCTAC
ACGACCTCAA CTCAAGAGTT TTTTACCAGC TGCATCCAAA CGTATCAAAC CTGGATTGCA
AAGTATGGCA TTCAACAAGC TACGACTATG CTCGAAGTGA AAGCGTTGTT TGGCGGGCTT
ACGGTTGAAG TAGAGGCCAC CGTAGTTAAG TAA
|
|---|
| Protein sequence | MEKNITDPWA WGKYTNSVQA VEIKQPLGTL YCSGQVAIDT NGQPVNADMN TQLELTFQNL
EQLISEAGYE PSGIVRLNVY TTSTQEFFTS CIQTYQTWIA KYGIQQATTM LEVKALFGGL
TVEVEATVVK
|
|---|
| |