Gene Slin_6727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6727 
Symbol 
ID8715993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp87878 
End bp88966 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content43% 
IMG OID 
Productglutamine cyclotransferase 
Protein accessionYP_003391482 
Protein GI284005662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.740303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTG TTGCTAAATG CGCTGTCGTT GTAATCCTGG TGAGCCTTTG GGTTTCAGCC 
TGTCAACAGA ATAGAAAGAA GGAAGCTGAC GCCTCAAATC AGATTAAGGT TGATTTTGTA
GCCTTGAATA AATCAACTTA TCAAGTAGGT GATTCAATCC CGGTTCGTCT ACAGCAACCA
TTAAGTCAAG TCACGGCTAG TTGGGATAAC AAACCTGCTA TAAATCGATC GCCTGTCAAT
AACATTTTCT CCCTCGAGTC AGTCGATTTA AGCGTCGGTT TGCATCAGCT AGTAATAAAC
GCGCTTACTA TCAATAAAGA AAAGTTGACC GATACCCTTT CGATTGAAAT CTGGTCAGAT
GTTAAACCAG TAAAGCTTTC CTACTCTGTA TTAAAAACAT ATCCCCACCA AGCGAGCAGT
TTTACTCAGG GGCTTGAATT TCATCAGGAT GCCCTTTACG AAGGGACGGG ACAGATTGGG
CAGTCTAAGT TAATGAAAAT AGACTTACTG ACAGGCTCCG TGCTTCAATC GGTCTCTTTG
CCAGCTCCTC ACTTTGGCGA GGGGATTACG ATTGTAAACA ATCATATCTA TCAACTGACT
TGGACTTCGG GCCAATGCTT CCAGTATTCA ATGGATATGA CCTTACAGAA AACCCACACC
TATCATACCC AAGGCTGGGG CTTAACACAC CGGGATTCAA CGTTAATTGT TAGCGATGGC
TCGAACCGGT TATCATTTTA TACACCGAGT TTTCAGAAAA CGGGCGAGTT AATGGTGTAT
GACAACCAGG GCCCAGTAAT GAATTTGAAT GAACTCGAGT ATATCGATGG GTACGTTTTG
GCGAACGTGT GGCAAACGAA CCGCATCGTT CAAATTGAAT TGAAGTCGGG TAAAGTAATC
GGTGAATTAA CGATCGACCC TGGTTTACCA CCCGGCGTTG ATACCAAAGA AAATGTGTTG
AACGGGATCG CTTATCGAGC TCCAGAAGCT GTCTTATATA TAACGGGCAA GAATTGGCCT
AGCCTGTATA AGCTGAAAGT AAACGGCCTA TTTAAACTTA AGGGCAAGAA CACCGTCGCA
CTTCGTTAA
 
Protein sequence
MNFVAKCAVV VILVSLWVSA CQQNRKKEAD ASNQIKVDFV ALNKSTYQVG DSIPVRLQQP 
LSQVTASWDN KPAINRSPVN NIFSLESVDL SVGLHQLVIN ALTINKEKLT DTLSIEIWSD
VKPVKLSYSV LKTYPHQASS FTQGLEFHQD ALYEGTGQIG QSKLMKIDLL TGSVLQSVSL
PAPHFGEGIT IVNNHIYQLT WTSGQCFQYS MDMTLQKTHT YHTQGWGLTH RDSTLIVSDG
SNRLSFYTPS FQKTGELMVY DNQGPVMNLN ELEYIDGYVL ANVWQTNRIV QIELKSGKVI
GELTIDPGLP PGVDTKENVL NGIAYRAPEA VLYITGKNWP SLYKLKVNGL FKLKGKNTVA
LR