Gene Slin_6722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6722 
Symbol 
ID8715988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp80368 
End bp85392 
Gene Length5025 bp 
Protein Length1674 aa 
Translation table11 
GC content51% 
IMG OID 
ProductMethyltransferase type 11 
Protein accessionYP_003391477 
Protein GI284005657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCA GCCCCCCCAA CTGTATCCAG CTTAGTCTGT TCGGGCTTGT CTCGTCTGCC 
AATGTAGTGA CTTTATCGCA AGCCAGAGAC AGCCAAGGGT GTCTTTTGCC AAGTGATAGG
CTGAGCGACG AACCCAATGT CATTTTACCG TTTTCGGGTG TAGAATCAGG GTTAAACAGC
CGTAATTACC GACTGTCTGC TGATACGTTC TATAACCGGA CATTAAGCGA ACGTATAAAG
GCTAACGTTA AAGCCATTCA GTTAGCCAAG TTTCTTGCCA AAGAGAGCCG GAATGCTACG
GCCGACGAGA AAGGTATATT GGTGCAGTTT TCGGGCTGGG GTGGTTTGGC ATCTGCTTTT
GAGGAAAGTA GCCGCTACTC ATCGGTTATT GACGAAGTGC TGACGATGGA GGAACGGCAA
GCCGCAGCCG CTTCATGCTT AACGGCTTTT TATACGCCCC CTACCCTCAT TACCGCTATT
TGGCAAGCCG TTGACCAGTT CGGTTTTACA GGTGGACGCA TTTTAGAGCC AGGCGCAGGT
ATCGGGTATT TTCTGGGATT TACGCCCCCT TCAGTGAACG ACCGCGCCGA ATGGGTTGCC
GTGGAGAAAG ACCCTATTGC CGGGCTTATT TTGCAATTAC TGTATCCAGA TGCTACCGTC
GAGGTGGGCG GGTTTGAGCA AGCCGATCTA CCTAATGGCT CGTTTGACCT TGTTATTGGT
AACGTACCTT TTGGAGCCTA CAGCGTCTAT GACCGGCAGA ACTCCGATAT ATCGGCCTAT
CCGATTCATA ACTATTTCAT TGGCAAATCG GCGCGGTTGG TAAAGCCGGG TGGTTTGTTG
GCACTAATTA CCTCGTCGGG TACACTTGAT CAGGGCGGGG CTGAGTTCCG GCAATGGTTG
ACCCGTCAGG CTGAAACGGA ATTGGTTGGG GCTATCCGTT TACCATCCTG CGCGTTTGAG
AGCCACAGCG GTACGAGCGT AACGACCGAC GTACTGTTTT TGCAACGGCG CGACGGAGTG
AACCGTCAGT TTGCCGGACA TTCCTTTGAG CGAACCGTCA GCGTCCGGAG CCGAACGGTG
CAGGAAGAAG GCGAGGAAGT GACCAACAAC CTGTACGTAA ACGAATACTT TGCCGGGCGG
CCAGACTTTA TGCTTGGTGA AATGGTTTGG GCCGATGAAG TAGGCAAGGG TGGGTTGTAC
CGAGCGGACC GGCCAACCCT TTACTTAGAA GACCCGTCCG AGTTGACAGA TCGGTTAGGC
AATGCCATCA ACCAACTACC GAGGAGCTTT TTATCAGCGA GTCATGACGG ACAACCGAGG
AAGCAGCCAG CCGGAAATCA ACTTGCTGAT TTATATCCAG GCGTTGTACG TATAAAAGGC
CGGTCGTACA GTCAGGCCAC TATTATCCGG CAATACATTC GACTCCGCGA TACGTTGACG
GGCTTGTTAG AGGCCGAACG GGAAGGAAAA GACGATTGGG AGGTTGCCGT GTTGCGTACC
CATCTTAACA CACTATACGA TGAGTTTACC GCCTTCTTTG GTCCGTTGAC GGGCAACCGT
CATCTGTCAT TTTTAGAAAC GTTTGATGGT CAATTCAGCC GTGTTCAGGC GTTAGAAGTA
CCTGAAAAAG TTAACGGGAA ACAGGTTCTA CAAAAAGCAA CCATTCTCCG GGAGCGGGTA
AACGTAGGCC TCTCCTATCC AACTTCGGCA GCGTCAATAA CCGACGCGGT GAACCTGTCG
ATGTGGTTTC ATGGGGGCTT GACATTACCG GCCATTACAG GTTGGCTTGG GTTGTCGGTT
GCTGAGGTCA CTGAACAGTT GTTAGCCGCC GGTTTGGGAT TCATTGACCC TGTAACGGGC
AGTCTGATTG ACCGGGATGC GTACTTATCC GGTAACATTC GGCAGAAATT AGACATAGCT
GAGGAGAAAG CCCGTCACGA GCCGATTTAT CAGGCCAATG TGTACGCTTT GGAACAGATC
GTTCCTCCGA CGATTCCGGC CGCGTTAATA TCCTTTGGTT TAGGGTCGGT GTGGTTGCCG
GATGAATTAG TAACCCGATT TATTCAGGAG ACCTTACAAC TGCCAGAAGT AACGGCTACT
TACAACAACC GGAGCCGACA ATATGAGATT GAAGCACCAG CCTATTTCTA TTCGTCGTTG
AACCAGTCGT TGGGTACGTC AAATAGAACG GCCCTGCAAT TGATTGAATC GGCCTTGATT
AGCCGAAGTG TAATAATTAC CAAAACCATT ACCCAAGATG GTAAAGAACG CTCTGTTCGC
GATGTAGAAG CAACGAGTCA GGCAATTGCC GCGCAGGAAC GACTAAACGA GCTGTTCGTT
GATTTTGCCC GGCAACATTA CGAACCTGTC ATTGAAGAGA GGTTTAACCG CTTGTATAAT
ACGCATGTTC CCCGGCGTTT TGCCCGGCCA TCGTTTGGTC AGTACCCAAA TGCTAACCCA
GCCATTTCAT TACGTGACCA CCAGTTTCGG GCTGTTGAGC GCATCAAGAT TCAAGATACG
ATGTTGGCCC ATGCCGTAGG TAGCGGAAAA ACCTACACGA TGATTGCCGG CGCGATGGAG
TTGAAACGGC TAGGTATTGC CCGCAAACCG CTGTTAGTCG TACAAAACTC AACGGTTGAC
GATGTGGCCC GTAGTTGGCG GCTGTTGTAC CCGTCGGCGG TTGTATATGT GCCGCAACGG
AGCGATCTGG AAGCAACGGG CCGTAAACGG TTCCTGCAAC GAATAGCGAC CAACCACTTC
GACGGGATTA TTATTCCGCA AAGTTTCCTC AAACTGATTC CCGACGATCC GGCCAGCGAA
CAGGCTTTTT TGCAGGAGGA AATAAACCGG GTAGAAGCCG CCGTTGCCGC AGCGTCCCGC
CAGACCGAAC GCGGCCCGAA CAAGAGTAAG AAGTCATTGG TAAAGCGGCT GAATGAATTG
CGGCTACGGT TAGAAGCCCG GAGACTCCGG CAAGCCGACC GAAAAAAAGA TAATATCCTG
TCGTTTGATG AATTGGGCAT CGACGCGCTG TTTCTGGATG AATGCCACAA GTACAAGCGG
TTAGGCTTTT TTACGTCCCG GCGTGGCATC AAAGGCATTG ACCCGGCAGG TTCGGAGGAT
GCACTGAGCG CCATGTTTAA ATGTCGTTCG GTGCAGGCCC GGCAAGGGCG GGTTGTACTG
GCTACGGGAA CGCCAATCAG CAACACAATG GCCGAGGCAT GGACGATGCT CCGGTTTATC
GCCCCTGACC GCCTAGATGA AGCACGGATT GCCACGTTTG ACCAATTCGC GGGAGCTTTC
GGACAACTAA TTGCCTCATT CGAGTTAACG ACTACCGGCC AGTTTAAAGC AGTTTCGCGG
TTTGCCCGGT TTGTCAATGT CCGTCAGTTG TCGGAATTAT ACCGCGCTCA TGTTGACGTG
GTACTGAATG ATGAAGTAAT CGAGTTTCAG AGAGACCAAA CATTGCCAAC GCTGAAAGAC
GGTGGATTTA CGAAAATCGT ACTACAGCAG ACCGAAGGCG TACAGTATGA GTTAGACGCG
ATTCGTGAAC GGCTACGGTG GTTTGAGGGA TTAACAGGCA GTGAGAAGCG GGAGAACAGC
CATTTGCCGT TGGTACTCTT TGGACAGGCC AGAAAAGCTA CGTTAGACAT TCGACTGTTG
AACGCCAGAA ACGAAGACGA GCCAGGCTCA AAGCTAAACC GAGCCGCAGC GGAGATTCTA
CGGCTGTATC AGCTCTCAGA TTCCTATAAG GGTACTCAGT TGGTTTTTGC CGACGTATAC
CAGTCACCGG CAAACTTATT TGCTGATGAA GACGAGCGAC TATGTGTTGG GGCTCGGTTT
AATCTCTTCG ACGACCTAAA AATGAAACTG GTTGCCGAAG GTATTCCGGC CTGTGAGGTG
GCCGTTTGCC CCGCCGAAGC AGATAAACGA GAAGCGGTTT TTGCCAAAGT CCGAACGGGT
GAGGTTCGGG TAATGCTGGG TACGTCCGAG CGAATGGGCG TTGGGGTTAA CGTGCAGGAA
CGGTTAGTTG GCTTACATCA TCTTGACGCG CCAAACCGCC CGACCGATTT TGAGCAACGC
AATGGGCGTA TCATCCGTCA GGGGAACGCA CATGCCGCCT GGAATATGCC AATTGAAATT
CTTACCTACG GCGTTGATAA AACACTCGAT GCGACTGCCT ACGGACGATT GGCGATCAAG
CAAAAGTTCA TTAACCAAGT ACTGAAAGGG CACCTGACCG ACGAAACCGA ACGCGGCCCG
GGTATGAATG ACATTTCGGC TGATGATGAT TTTGCTGCTA TGTCGTTCGA TCAGATGATG
GCAACCCTTT CGGGCAGTCA GTATGCCTTA GCCTATGCCG CTAAACAACT TGATTTGTCT
CGATTGCTGA CTGCTCGTAA GAACTGGCAA CGGGGCGTTT TGGATGCTCA GATGCAGGTA
GAACGCGCCC GGCGTACATT GTCGGTGCAG GTGCCTCTAC TGCCAACGCT CCAGGCAGAG
AGCGCCATAC TAAAGACTCG GTTTATTACT GACGGAGAAG AGTACAGAGT AAATGAGGTG
ATAATTGAGA GCGAAACCCA TACCGAAAAG TTTGGTGGAC CAGTGCAACA GATGCTGGAC
AAAATGCGCG GCCAGCTAAA ACGTCGGTTG ACACCGCAGG CAATCGTTAC GGTAAACGGG
CTACCTCTGA CATTGACCGG CGAGATTCGG CAAGACCCCT TTTCATTTCG GAACGAGTAC
GTATTTATCT ACCAGTGGGG AAGCAGTTTG CAGGGTGAAG TAATGAGCGG TCCCGGCTTG
TTTCAGTCCT TACGCCAGTC GGTGGCCCAT GCTGCCCACT TGCCCGCGCA ATGTCAGCAA
CGAATTGAAC GAGCCCGCAC CGACGAAGCG GCTTTTCTGC AAAAGGTTAA TGAACCGTTT
CGCCACAGCG AAAAATTAGC TCAGTTGGAA ACGGAGATTG CCGAACTACA GGAAGCCATG
TTGGCCGAAT CAGAGCCAGA AGTCGAAGCG GTATTGGCAG AGTAA
 
Protein sequence
MQVSPPNCIQ LSLFGLVSSA NVVTLSQARD SQGCLLPSDR LSDEPNVILP FSGVESGLNS 
RNYRLSADTF YNRTLSERIK ANVKAIQLAK FLAKESRNAT ADEKGILVQF SGWGGLASAF
EESSRYSSVI DEVLTMEERQ AAAASCLTAF YTPPTLITAI WQAVDQFGFT GGRILEPGAG
IGYFLGFTPP SVNDRAEWVA VEKDPIAGLI LQLLYPDATV EVGGFEQADL PNGSFDLVIG
NVPFGAYSVY DRQNSDISAY PIHNYFIGKS ARLVKPGGLL ALITSSGTLD QGGAEFRQWL
TRQAETELVG AIRLPSCAFE SHSGTSVTTD VLFLQRRDGV NRQFAGHSFE RTVSVRSRTV
QEEGEEVTNN LYVNEYFAGR PDFMLGEMVW ADEVGKGGLY RADRPTLYLE DPSELTDRLG
NAINQLPRSF LSASHDGQPR KQPAGNQLAD LYPGVVRIKG RSYSQATIIR QYIRLRDTLT
GLLEAEREGK DDWEVAVLRT HLNTLYDEFT AFFGPLTGNR HLSFLETFDG QFSRVQALEV
PEKVNGKQVL QKATILRERV NVGLSYPTSA ASITDAVNLS MWFHGGLTLP AITGWLGLSV
AEVTEQLLAA GLGFIDPVTG SLIDRDAYLS GNIRQKLDIA EEKARHEPIY QANVYALEQI
VPPTIPAALI SFGLGSVWLP DELVTRFIQE TLQLPEVTAT YNNRSRQYEI EAPAYFYSSL
NQSLGTSNRT ALQLIESALI SRSVIITKTI TQDGKERSVR DVEATSQAIA AQERLNELFV
DFARQHYEPV IEERFNRLYN THVPRRFARP SFGQYPNANP AISLRDHQFR AVERIKIQDT
MLAHAVGSGK TYTMIAGAME LKRLGIARKP LLVVQNSTVD DVARSWRLLY PSAVVYVPQR
SDLEATGRKR FLQRIATNHF DGIIIPQSFL KLIPDDPASE QAFLQEEINR VEAAVAAASR
QTERGPNKSK KSLVKRLNEL RLRLEARRLR QADRKKDNIL SFDELGIDAL FLDECHKYKR
LGFFTSRRGI KGIDPAGSED ALSAMFKCRS VQARQGRVVL ATGTPISNTM AEAWTMLRFI
APDRLDEARI ATFDQFAGAF GQLIASFELT TTGQFKAVSR FARFVNVRQL SELYRAHVDV
VLNDEVIEFQ RDQTLPTLKD GGFTKIVLQQ TEGVQYELDA IRERLRWFEG LTGSEKRENS
HLPLVLFGQA RKATLDIRLL NARNEDEPGS KLNRAAAEIL RLYQLSDSYK GTQLVFADVY
QSPANLFADE DERLCVGARF NLFDDLKMKL VAEGIPACEV AVCPAEADKR EAVFAKVRTG
EVRVMLGTSE RMGVGVNVQE RLVGLHHLDA PNRPTDFEQR NGRIIRQGNA HAAWNMPIEI
LTYGVDKTLD ATAYGRLAIK QKFINQVLKG HLTDETERGP GMNDISADDD FAAMSFDQMM
ATLSGSQYAL AYAAKQLDLS RLLTARKNWQ RGVLDAQMQV ERARRTLSVQ VPLLPTLQAE
SAILKTRFIT DGEEYRVNEV IIESETHTEK FGGPVQQMLD KMRGQLKRRL TPQAIVTVNG
LPLTLTGEIR QDPFSFRNEY VFIYQWGSSL QGEVMSGPGL FQSLRQSVAH AAHLPAQCQQ
RIERARTDEA AFLQKVNEPF RHSEKLAQLE TEIAELQEAM LAESEPEVEA VLAE