Gene Slin_6717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6717 
Symbol 
ID8715983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp77259 
End bp78218 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content49% 
IMG OID 
Productdomain of unknown function DUF1738 
Protein accessionYP_003391472 
Protein GI284005652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000323608 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.58549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATG CAAAGGCTTC CGCACAGCGG GGCAGTATGG ATCTATACGC CCGGGTTACT 
GATCTCATCG TCGACGAGCT TGAAAAAGGC CGTATCCCAT GGCGCAAACG GTGGGGTATC
CTGAAAGATG GGCAGATTGA GGTGGCTCAA AATTACATAA GCAAACGCTC CTATACGGGT
ATAAATAGTG TCCTTTTGGG ATGCGCTAGC TATGAACGCC CGTATTTTCT GACCTTCAAA
CAGGCAACAG AGTTAGGGGG TAATATTCGC AAAGATGCGA AGGGAAATCT GGTCGTTTTC
TGGAGTGTGC TGGAGAAAGA AAAGGAAGTA ACGAACAACA AAGGCGAGGC CAAAATCAAA
AAGGTGGGCG TCCCGCTCCT TAAGCATTAT TTCGTTTTTA ATGTGGCCGA CGTAGAAGGA
GTAACTATTG ATTTGCCGGA GTTGAAAACA CCTGATGCCC TTGACGAAGT GTATAACTAC
AATGCCTGTG ATGCCGTATA CGCGGGTTAC TCAAATGCAC CCGAAATCGT GCATATTGAT
CCTGCCCGTG CTTATTACAG CCCGTTGCGC GATGTTGTGA ATATGCCCCG CCCTACGGCT
TTTGATTGCC TGGAAGCTTA TTACTGCGTT TTATTTCATG AACTGATTCA CTCAACTGGC
CACCGCGACC GCCTGAACCG GGAGGAGTTG GTACATTCTG ACGGGTTTGG TGGGGAGTTA
TACGCTAGAG AAGAATTAAC AGCCGAAATC GGAGCCTGTT ATCTGGCCAG CAGTTGCGGC
CTTGACCTGA CAGACCACCG GCTTTTGACC AATGCAGCCG CGTACCTGCA AAATTGGCTG
TCGGCTTTGA AAGGCGACAA AACGCTAATT TTCCGGGCAT CGGGACAGGC TCAGAAAGCC
GTCAACTATG TACTAAATGA CGTAACTGAA GAAATAGCTT CGGATGTTGT AGCGGCCTAA
 
Protein sequence
MQNAKASAQR GSMDLYARVT DLIVDELEKG RIPWRKRWGI LKDGQIEVAQ NYISKRSYTG 
INSVLLGCAS YERPYFLTFK QATELGGNIR KDAKGNLVVF WSVLEKEKEV TNNKGEAKIK
KVGVPLLKHY FVFNVADVEG VTIDLPELKT PDALDEVYNY NACDAVYAGY SNAPEIVHID
PARAYYSPLR DVVNMPRPTA FDCLEAYYCV LFHELIHSTG HRDRLNREEL VHSDGFGGEL
YAREELTAEI GACYLASSCG LDLTDHRLLT NAAAYLQNWL SALKGDKTLI FRASGQAQKA
VNYVLNDVTE EIASDVVAA