Gene Slin_6715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6715 
Symbol 
ID8715981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp75669 
End bp76787 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391470 
Protein GI284005650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000687722 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.490273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC TCATTATTTC TGTTAGCGCG CTCCTCATCC TATCGGGTCC GGGTATGGCG 
CAACGCAAAC CAACGTATAT CAAGCGTACG TACGCAAAAT TGATAAACAA GCGGGACGTA
CCGGCCCGGT CTCCCATCCC TGAAAGCCCT GTGCTGTTAG TTCAGCAACA AACGGTTGGT
AAGCCAGACA GCACGCTTCG AGCTGAAAGT AAGTTTGCCG TAAACTTCCC TGAGAACAAG
CCGGTATCGG CTTCAGGGGC TCCGCGCACT TCTCCAGAAG CGCTTATACA ACCCCAGCAC
ATAATCCGCT CGTACTACGT CGATTTGGCA TACAACAAAA CAGTATCAAT CATCTTTCCA
ACGGCCGTAC GGTCAGTCGA CCTAGGAAGC CGCAGCATCA TGGCCGACAA AGCGGCTGAC
GTAGAGAATG TGCTGAAAGT AAAAGCGTCG CAAATCGGCT TCAACGAAAC TAACTTTTCG
GTAATGACCA CCGACGGCAA GTTCTACAGC TTCGTGGTCA ACTACAATGA AACACCAGCG
GTCCTGGCCC TCAACTTGGC AGGGTCTGGA AATACGAATC TGGGAAGCCA GGGCAGTCAG
ATTAACTTAA ACGATCGCAC CCAATCTGTA AATGGTCTCG ATGGCCAAGA AGGAAATATT
CAGTTCGCAG GGGTAAAAGC AACTCAGTCA GACATCGTTT ATGCCAGTGA CCGCATACTA
CACAATCGAA GCCGGGGAAA ACGGGGAACT GAGGCCAACA AGATGGAGGC TCATTTACGT
GGTCTTTATG TAAAGGATAA CGTGCTTTAC TACCGGTTGG CCATCGAGAA CGAATCGAAT
CTAAACTACG ATATCGATTA CGTGCGGTAC TTCATTGTAG ATGGCAAAAC AGCAAAACTG
ACCTCCCGGC AGGAAATTGA ATTAAGGCCT ATCTATGTGC ATAACGAAGC AATTACCACG
GTGCGTGGAC ATCAAAGGGT CGAGCGTGTA TACGCCTTTC AGCGGTTTAC TATACCGGGC
AATAAGCAGT TGCTGATTGT GATTGGCGAA CAGAATGGCG GTCGGGAACT AGCATTTCAG
GTACAGAACA AGGACATCAT GAAGGCCCGG CCATTATAA
 
Protein sequence
MKRLIISVSA LLILSGPGMA QRKPTYIKRT YAKLINKRDV PARSPIPESP VLLVQQQTVG 
KPDSTLRAES KFAVNFPENK PVSASGAPRT SPEALIQPQH IIRSYYVDLA YNKTVSIIFP
TAVRSVDLGS RSIMADKAAD VENVLKVKAS QIGFNETNFS VMTTDGKFYS FVVNYNETPA
VLALNLAGSG NTNLGSQGSQ INLNDRTQSV NGLDGQEGNI QFAGVKATQS DIVYASDRIL
HNRSRGKRGT EANKMEAHLR GLYVKDNVLY YRLAIENESN LNYDIDYVRY FIVDGKTAKL
TSRQEIELRP IYVHNEAITT VRGHQRVERV YAFQRFTIPG NKQLLIVIGE QNGGRELAFQ
VQNKDIMKAR PL