Gene Slin_6714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6714 
Symbol 
ID8715980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp74320 
End bp75642 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391469 
Protein GI284005649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000258081 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.407445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTA CCGATCCGAC TCAACCAGAA AATTACATCG CTAATCCGTC ACCTGCGGAT 
ACGACTGATC CGGCCGAAGC ACCAACGGCT CGCAAATCGT TTCAGGACGT TTTGAAAGAC
AAACGATTTT GGATGACAGC ACCAGTGTTG TTACTCGCGT TGGGATCAAC CGTGTACTTC
CTGATTTCGG GGACTGAGGG TAAACAAATG CCCCTCATTA ATAATGTGAA CGCAACGATC
CCTATCGCAC AAACCGACAG CGTACCCAAG TCTAAGTTGG AGTTACAGGC AGCCCAGCAG
CGACAAGGCT TAAACAGTCA GTCTACCGTC AACGGTATGC AAACTGGTGT TGTCGCTGCA
ATACCTGAAT CAGCGCCCTC TACGGGTTTA CCTGCTACGC TCGACCCTTA CGTATACAAG
CAAAAACGGA TGCCCGAAGC AATCGATCCG GAATTTGCCG CGATGGACTC GTTGTATAAC
CCTTCGCCCC CTCCGCGTCA AAACAGGGTA AGAGGTAGGC CCCGTCCAAC CAATCGAATT
CGGGCGGTCT CAACAGGTTA TGCCCAAACG GCACTTCCTG ATGAATTTGA TGAGGAGGCA
TTGCCCAGAC GGGATGTGCA GAAACAAGTA GAGGATAGAC AGCGATTACT GGCTTTATTG
ACAGAGTACA AGCGGGACAA AGAAGCCAAG GCGGCTATTG CCCGCGAAGG GGAGCGGCCG
CGTAAGGCAG AATCAGGAGC CGTCGTCTCT ACGTTGGGGG AAACCACCAA TCGACGATTG
AATGGTTTCT ATGGGTTATA CACACAGGAC CAGAAAGGGG GTCAGGAATC GGCTTTAACG
GAAGATCTGG GCACCATCCG GGCGGTCATT CATCAAGATC AGCAAATTAC CGATGGAGGA
CGGGTACAGC TTCGCCTACT GGAGCCAGTG ACTGTACGTG GTATTCTCAT TCCGGCCAAT
ACACTGGTTT TCGGTACTGG CAGTTTTGGG ACGGAACGCG TGGGTATTAC GCTGAGTAAT
CTTCAGTACG AAGGACAAAT ATTTCCAATC AAGCTCACAG TGCATGATAT GGACGGTATG
CCTGGCGTGT TCGTACCGAA CGTGCTGGCC GCACAGGAAG GAAAGCAACT TCTGGGACAG
ACCATTGGTG GGGCCAACTA CAATTTGAAT GGTACCTCAG CCAATAGCGC CAAAGCAGCC
GCAGCAATGG CCGGCATATC AGCTGCACAG TCAGGCCTCT CTGGTGCTCG AAGCATTCTT
CAACGAAAGA TTGTCCAACA GAAGGCTACA CTGAAAGGAA ACTATTATGT ACTGCTCAAA
TGA
 
Protein sequence
MNLTDPTQPE NYIANPSPAD TTDPAEAPTA RKSFQDVLKD KRFWMTAPVL LLALGSTVYF 
LISGTEGKQM PLINNVNATI PIAQTDSVPK SKLELQAAQQ RQGLNSQSTV NGMQTGVVAA
IPESAPSTGL PATLDPYVYK QKRMPEAIDP EFAAMDSLYN PSPPPRQNRV RGRPRPTNRI
RAVSTGYAQT ALPDEFDEEA LPRRDVQKQV EDRQRLLALL TEYKRDKEAK AAIAREGERP
RKAESGAVVS TLGETTNRRL NGFYGLYTQD QKGGQESALT EDLGTIRAVI HQDQQITDGG
RVQLRLLEPV TVRGILIPAN TLVFGTGSFG TERVGITLSN LQYEGQIFPI KLTVHDMDGM
PGVFVPNVLA AQEGKQLLGQ TIGGANYNLN GTSANSAKAA AAMAGISAAQ SGLSGARSIL
QRKIVQQKAT LKGNYYVLLK