Gene Slin_6711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6711 
Symbol 
ID8715977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp71467 
End bp72351 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391466 
Protein GI284005646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.112808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.194949 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC GAACACTATA CTGGGTTTGG CTCGGCTGCG TAGCTGGTAC TGCCAACGCT 
CAGATGCCCT CCGCCAATGC AATACCAACT GGAAACAGGG GTAGCAACGT CATTCAATCC
GAGATAGACC AACTATTAAG CATGTCAGAA AGCGACATAA TGGCGGGTTT AAAAGATGCT
GGACTCGACT ATGGTGAACT CATAAAAGAA AAGGTCATGG ACGAGGTAGT CAAAGGGATT
GCTGATGCTA CTGTACTGGC TCCTATTGCT ACCGAGATCA TGGAGCTATA CCAGAAACAG
AAGAATAAGG ACCTCGCCAA AGCCATCGAG AAGTTGAAGA GAACGTGGAA AGATGGCCAG
GAACGGATCA ACAAAGTTCG TTATCAGGAT TTCAAAGTCA AATACACCTA TCAGCAGGCA
ATGAATAAAG CCCCGTTAGA CGTGATGCAA GGCACCCGTC GCCAGGCCAT TGACGAGTCA
GTAAAGGCAT TGTGGACAGA TGGGCTGCCT GTCGCCATAA CAATAACAGA TCCCACCAAT
GCTCGGCTGA TGAAAGAGGA CATTGATGCG CGCTATCCAA ACGAGGACCG GAACGCCGGA
CCGATTGGCT GGACAGTGTT AGCCTCAGCT CGCTCGTCGT TGCTAGCCGA TGACAAAACA
TTGAAGGCAA AAATGGCCCT CGTTGAGAAG CAGGGTCAAA CGGCGTACCT ATCACCAGCG
GACCGGCTTC GGCTGCTTCG CGAAATTGAT AAAGAAAGCA AGGCCCGTCG CACAACGCTA
CTGGCGATGG ACAAAATCAC TTCGCAGGGG CTGGACTACT ACAAATACCA ACGTAATCGG
AAAGCTTACC AAACTAAATA CCTACGAACC CAATCGTATC GCTAA
 
Protein sequence
MKKRTLYWVW LGCVAGTANA QMPSANAIPT GNRGSNVIQS EIDQLLSMSE SDIMAGLKDA 
GLDYGELIKE KVMDEVVKGI ADATVLAPIA TEIMELYQKQ KNKDLAKAIE KLKRTWKDGQ
ERINKVRYQD FKVKYTYQQA MNKAPLDVMQ GTRRQAIDES VKALWTDGLP VAITITDPTN
ARLMKEDIDA RYPNEDRNAG PIGWTVLASA RSSLLADDKT LKAKMALVEK QGQTAYLSPA
DRLRLLREID KESKARRTTL LAMDKITSQG LDYYKYQRNR KAYQTKYLRT QSYR