Gene Slin_6710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6710 
Symbol 
ID8715976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp70649 
End bp71470 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391465 
Protein GI284005645 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.688835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.245956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCCA TTCAGGGCGG TGTTAGGAGC GTACCAAATG ACTTACACTT TAAGCCGACG 
GTGGCTGAAG TGGATACCAC AAATCCGGGG CAACCTCCAC AACAAGGACC ACCGGGCCAG
ACGTTGCTTA GTGGTTTAGA CGATGAGTTA TCCGGGGAAA TCGAGAGTAT CATCGGCGAA
ACAGAGAATT CCATCATGCA GGGTATTCAG GATGAACTTA CTGGATTGCT CGGTAATGCC
CTGGGCCAAC TATTTGACGT CTCACCAATC TCGGCAGTTA AATCGCTCCA GTCGATGGTA
AAGGACGGTT TATCTAAGCA GCAAAAGATC GAGTACCAAA ACTACAAGGT AGACTACGCC
TGGAAAAAAG CACACATGGA GCTCTCGCCT GCCTTTGCTA CATACTATCG GGAGCTAAAT
CTGAACCAGC TTACCGGTGC CATTGGGGCC AGTAAGAAAG CGGCCGACAA ATTTCTGAAT
ACGTCAGCAT TTACGGCTAA AGAAGCGGCA GCAATGCGAC AGGTTTTACA GGGGGTTGCT
GAGACGAGCG ATTTGGAAGC TGAGGTTAAA ACGATTATTA ACCTCGGCGG TAAACCGGTG
TGGATGTCAG AAGGAGAACG GTTATCGGCC CTAAACGCCG TGCGAACGGA CCTTTACGAC
CGAATTAAGC GGACCAATCA GACATTAGCC CTAATCCGAG CGACCTATCA ATTCCGATCT
CGGGAAATAG CTAAAAACGC TTATAGGCAG GGATTGTACA AACAAAACTC AACGCTCAAC
CGGACAGTAA GCACCCGCTC CACTACCTAC CAAACCAGAT GA
 
Protein sequence
MYPIQGGVRS VPNDLHFKPT VAEVDTTNPG QPPQQGPPGQ TLLSGLDDEL SGEIESIIGE 
TENSIMQGIQ DELTGLLGNA LGQLFDVSPI SAVKSLQSMV KDGLSKQQKI EYQNYKVDYA
WKKAHMELSP AFATYYRELN LNQLTGAIGA SKKAADKFLN TSAFTAKEAA AMRQVLQGVA
ETSDLEAEVK TIINLGGKPV WMSEGERLSA LNAVRTDLYD RIKRTNQTLA LIRATYQFRS
REIAKNAYRQ GLYKQNSTLN RTVSTRSTTY QTR