| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6705 |
|---|
| Symbol | |
|---|
| ID | 8715971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013731 |
|---|
| Strand | + |
|---|
| Start bp | 66325 |
|---|
| End bp | 67002 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391460 |
|---|
| Protein GI | 284005640 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.873514 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.122686 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACAC TATGGATCAG TGCATCCCTG CTAGCTCTGA CGGGCTGGCA GGGTTACCGG
TTAGGAAAAG AGTATGGATG GTGGGGGAGA AACACAACCG CATCTGAAAA GGGGAAGGTG
GTCGAGATGC CTTCATTAGA AAACACCATA TCAACAGAGA ATGGCTTGGG CCGTTCAAAA
ACCAACTTTG GGAAGTTACT GGGTGGATTT AAACTAACAA GCCAACAAGC CTTTGAAACC
GATGATAGCA GCATCGATGA CGAGACGGAG GAACCAATTA TTGAGCCAGC CACAACCCTG
ATGCCGAAAG ATGGACTTAC AAACGAAATT GAGTATCCAG CCGAAACGGA TCAGATACCC
GAAACGTGCA GCTGGATGGA TGATGAAGCT ATTTCACTAG TCGACTTTGA AAACGATGAA
GAACCAGAAA GTGATCAGTC ATTTGTGCCA CTAAATGAAT ATGTAAAGCG AGTACATACA
GTTCAACGAA AAATGACGCA ACTGAACAAA CGACGCAACG CAGATACAAG CTTTGTGAAA
CAAGACCTAG GGCAATTAAT CAATACGTAT CAGCTTGAGA ATGACCAGGC ATTAGATTGG
CTTTTCCAAC AGCAGGAGCA AACGTCTAAA ACTGATTACG GCTCGCTCTT CGATCGAATC
GAAAGCTTAA CAACCTAA
|
|---|
| Protein sequence | MITLWISASL LALTGWQGYR LGKEYGWWGR NTTASEKGKV VEMPSLENTI STENGLGRSK
TNFGKLLGGF KLTSQQAFET DDSSIDDETE EPIIEPATTL MPKDGLTNEI EYPAETDQIP
ETCSWMDDEA ISLVDFENDE EPESDQSFVP LNEYVKRVHT VQRKMTQLNK RRNADTSFVK
QDLGQLINTY QLENDQALDW LFQQQEQTSK TDYGSLFDRI ESLTT
|
|---|
| |