| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6700 |
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| Symbol | |
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| ID | 8715966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013731 |
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| Strand | - |
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| Start bp | 60379 |
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| End bp | 62436 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirD4 protein-like protein |
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| Protein accession | YP_003391455 |
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| Protein GI | 284005635 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.170783 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGC AGGATAAAGA GTATAGGGGC ATACTGAATA TGCTCCTGTT TATGTCGTTA
GCTCTGATTG GATTTCATCT GTACTTCTTC TGCTACGATA CGTTACAATC AATAGGTTTC
AGCTTTGCCC TACTAGACCG GTTCATCTTG AGCATCGACA GGGCAACCCA CCTTTTTTCT
CACCCAGTTT ACTCCAAGAT AGCTGCTTTA TTACTTCTGG GGATATGGAC GTTTGGTAAC
AAAACGCGTA AGCAGCTAAA TGTAACCTGG GCGCATGTTG CACGAGCCGG TATTGTTGGT
GGGGCATTGT TGTTGATGAA TGGAGAACTC CTGCGGGTAT TCTGGCTATC AGCTGAAACA
CGGAATGGAG CTTATTTGAT GGCGACCCTG ATCGGCTATT TGCTCTTGAT CAAAGCGGGG
AGTTACGCCA ACCAGATTTT GAGTGTTCAA ATTGGAGAAG ATGCTTTCAA CGACGAAAAT
GAGTCGTTCG AGCAGGAGAC AGGGCTAAAA CAGAATGAAT ATTCGGTCAA TATTCCAACG
GAATACAACG TCAAGAAGAG GATTCGAAAA GGGTGGGTAA ATGTGGTCAA TCCGTTTCGG
GCAACGTTGG TTATGGGTAC GCCTGGATCA GGGAAGTCGT TTGCCGTGGT GAATAACTTC
ATACGGCAAC ATCTTGAGAA AGGGTTTACC ATGTACATCT ACGATTATAA ATTTCCCGAT
CTGTCGAATA TCGCGTACCA TTACTTACAG AAAAACCGTC GGGCATTTAA ACGAATGCCG
ACATTCTACG TCATCAACTT TGACGACCCT CGTCGCTCGA ATCGGTGCAA CCCGCTATTG
CCAGAGCTGA TGTCTGATAT TATTGATGCA CAGGAAGCAG CCCGGACCAT TCTGTTAAAC
CTAAATAAAT CATGGATTCA GAAACAAGGC GATTTCTTCG TTGAGTCGCC GATGAACTTT
CTGACGGCTG TTGTCTGGTA TCTCAAAAAG TATGATGAGC GTCGATTGAG AGGTTTGGCA
CAGCAGGGGT TGCCTGACGA CGGTCAGCGT TACTGTACGT TTCCCCATGT CATTGAGTTT
GCCGGGGCTG AATACCGCGA GCTTTTCCCG ATCCTGCAAT CGGAACCCGA GATCGAAAAC
TTGCTTAAAC CGTTTGCCAG CGCCCTCAGA AATGAGGCCT ACGAGCAGTT GGAAGGTCAA
ATTGCTTCCG CCCGAATTCC ACTTTCCCGA CTCTCCAGCC CGGCTCTTTA TTGGGTAATG
ACGGGTAATG ACTTTAGCCT GGACATTAAT AATCCGGATG ATCCCAAAGT ACTATGTGTA
GGAAATAACC CGGAACGCCA GGAAGTCTAT GGAGCTGCAC TTGGTCTCTT CAATGCCAGG
CTAATCAAGC TCGTCAACAA GAAAGGTCGG TTGAAGTCAT CTCTAATCAT CGACGAATTG
CCCACTATTT ATTTCCGGGG GTTGGATAAC CTGATTGCGA CCGCACGGAG TAACAAGGTG
TCCACCTGCC TGGGGTTACA GGACCTAAGC CAGTTAAAGC GTGATTACGG GGATAAGGAA
GCTACCACCA TCTTTAACAC GATCGGAAAT GTGTTTTCGG GTCAGGTGCT GGGCGAAACG
GCTAAAACAA TGTCAAGCCG GTTTGGGAAA AACAAACAGG TACGCCACTC ACTCTCGTTC
ACGGAACGGG ATACAAACTT GTCTATTTCC GAAAATCTTG ATTCAGTGAT ACCCGAGTCT
AAAATCTCGA ATTTATCGCA AGGACATTTT GTCGGAGCAG TGGCTGATAA CTTCGATGAG
GTTATCAAGC AGAAAATATT TCATGCTCGG CTACTGGTAG AACCAGCGAT GATAGCCGAA
TTAGAGCGGG TAAAGCCCAT TCCGCCGGGT ACTGAATTTG CCCAAATCTC TGACCATCAA
CTAAGTTATA TGTTGGAGGC AAATTATAAC GGGGTGAAAA AGGATATTTC TGTGTTAATT
CAAGCCGAAA TTGAGCGGCT GACCAATGAC CCAGCATTGA AACACCTGGT CGAGAACCTA
CAACCTAAAA ATGAGTAA
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| Protein sequence | MGTQDKEYRG ILNMLLFMSL ALIGFHLYFF CYDTLQSIGF SFALLDRFIL SIDRATHLFS
HPVYSKIAAL LLLGIWTFGN KTRKQLNVTW AHVARAGIVG GALLLMNGEL LRVFWLSAET
RNGAYLMATL IGYLLLIKAG SYANQILSVQ IGEDAFNDEN ESFEQETGLK QNEYSVNIPT
EYNVKKRIRK GWVNVVNPFR ATLVMGTPGS GKSFAVVNNF IRQHLEKGFT MYIYDYKFPD
LSNIAYHYLQ KNRRAFKRMP TFYVINFDDP RRSNRCNPLL PELMSDIIDA QEAARTILLN
LNKSWIQKQG DFFVESPMNF LTAVVWYLKK YDERRLRGLA QQGLPDDGQR YCTFPHVIEF
AGAEYRELFP ILQSEPEIEN LLKPFASALR NEAYEQLEGQ IASARIPLSR LSSPALYWVM
TGNDFSLDIN NPDDPKVLCV GNNPERQEVY GAALGLFNAR LIKLVNKKGR LKSSLIIDEL
PTIYFRGLDN LIATARSNKV STCLGLQDLS QLKRDYGDKE ATTIFNTIGN VFSGQVLGET
AKTMSSRFGK NKQVRHSLSF TERDTNLSIS ENLDSVIPES KISNLSQGHF VGAVADNFDE
VIKQKIFHAR LLVEPAMIAE LERVKPIPPG TEFAQISDHQ LSYMLEANYN GVKKDISVLI
QAEIERLTND PALKHLVENL QPKNE
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