Gene Slin_6699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6699 
Symbol 
ID8715965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp59976 
End bp60386 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003391454 
Protein GI284005634 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.181596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG ACCGTATTAT ACCAGGAATG GAACAATTAG AAAAGGAAAA TGATGCGTAT 
GCAGCACTTA TAGCCCGGCG TATGGCTAAA GTACGCGAGT TCCTGAAAAT GAGCCAACAG
GAACTCGCTG ATGAGTTTGG TACCACGCAA AATCTGATCT ATCGTTTAGA AAACGGGCTG
AAGGTCTCGC GTGAAATGTT CACGCTGATT GCACTCTATT ACGTAAAACG CCACAAGGTA
AGCTACGAAT GGCTTTACAA CCCCGAGCCG GAGGAAGAGC CAAACGTACC TATGTTCACA
AACGAAGTGA TCAAGCGTCA ACGTATTAAT GACCAGCGTG AGGCCCAACG ACTCGCACTA
CTCCATCAAT TTATGGAAGA AATAAGTAAG GTTGAGCAAA AGCCAGAATA A
 
Protein sequence
MSNDRIIPGM EQLEKENDAY AALIARRMAK VREFLKMSQQ ELADEFGTTQ NLIYRLENGL 
KVSREMFTLI ALYYVKRHKV SYEWLYNPEP EEEPNVPMFT NEVIKRQRIN DQREAQRLAL
LHQFMEEISK VEQKPE