Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6696 |
Symbol | |
ID | 8715962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | - |
Start bp | 55627 |
End bp | 57042 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391451 |
Protein GI | 284005631 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.116311 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATTA GACCGATAGC GACCACACAG GGATGGGGTT CAATAGCACA GCAGATGCTT GATCTGGTAG GGGAGGCCTT TATTAAAGAG ATTCGGCAGC AACTTGCGAG TGACGAACCT GTGGAAGGGT CAATCCAGTA TGTGTCGGAG ATGGATTCAA CTACTCAACC AGCTTCTATC GAACTGAGAT TTGAGAATAC GTCTCATGCG CAGCATCTGT ACCACCGTTT AGCAAATGAT CGCCAGCTAG ACGTGTACTG TACTCTCTCC TCGTCAGTTA GGTCTACGAT AAACCAATCC AAACCGTGTG ACACACAAAA GGAACAGGGT ATTGACATAT ACATTTTCAA TGACCAATCG GCGGTCGAAC TGACTGACGA GAGGTACCGT CGAGATGAAC CGCTTTTTTT TCCAGCAATG AGGGCCATAA GCTGGCAAAA GCCTGTACTC TTGGTTGGTG ACCCCGATTG CCCTACAGAG ATGAATCTGT ATCGGTTGGG TTATCGGGAA GCTATAAAAA TGCCTGAAAC CATACTTTAC AGGCATTACG ACCCGAATAT GCCACTAGTT GGCTACGGCT ATGCGGACCG TCAATTTCAT CTGACGGTTT TCAATAAAGG GCAATCTCCC AGGGTCGTTT CTATCCCCGA TAACTTATTA GGAACAGGTC AGCTAGTGAA TCTGCGCCTG TCAAGCCCTG TTTCAACCGA ATCGATGGTT GTGTCACCAT TAGGGGAGAA GCCAATAGTA AATCGTCAAG TCCAACCAGT AGTAGGAGAG GCTCGATACC CAGATTCATT GCTCAAGCAG GCTACTCGTC AGTTTGCTGT CGAGCTGACA GGCGAGAACG CAAAGCGATT GCTTAATGGG CAAAAAACGG ATGTCGTCAA AACAGGAGAT GGCAGCATTG GAAAGCTGTA TGTGCTGAAT ACGCCAGATA ACGGCCCGCA ACTTGTGCTT CAGGACGTCC AGCACAAGTT GACACTCAAA GAAAGTTACC TGGGACATAC CTTCTCCGAT AAGGATAAAG CAAACCTCCA TAAGTATGGC GACATGGGCC GGGTTGCCGA ACTAGTTGAC AAGCAGAGCG GCCAAAAGTT CACTGGCTTC ATTGGTGTAG ATAAAGACAC TAAGACACTA ACCGTACTTC GCGCGGATGT GATCCGACCA AAAATTGAGC GGATGTCCCA TTTGAAAGGC GTAACACTTA ATGGCTTGCA AAAACAGCGG CTGATCGAAG GAAAGGCCGT TCGGCTCGAT AACATGACGA GTAAAGCCGG CACAGCTTTT TCGGCCTACG TGCGTGTATC AGCGGCAAGC CGAGGCCTGC GTTTCGACCA CATCCCAAAT GGTACACCCG AAAAAAACGG TTCGAAAATC GCGCCTGACA CCAGCGGAAA ACACAATACG GATTAG
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Protein sequence | MQIRPIATTQ GWGSIAQQML DLVGEAFIKE IRQQLASDEP VEGSIQYVSE MDSTTQPASI ELRFENTSHA QHLYHRLAND RQLDVYCTLS SSVRSTINQS KPCDTQKEQG IDIYIFNDQS AVELTDERYR RDEPLFFPAM RAISWQKPVL LVGDPDCPTE MNLYRLGYRE AIKMPETILY RHYDPNMPLV GYGYADRQFH LTVFNKGQSP RVVSIPDNLL GTGQLVNLRL SSPVSTESMV VSPLGEKPIV NRQVQPVVGE ARYPDSLLKQ ATRQFAVELT GENAKRLLNG QKTDVVKTGD GSIGKLYVLN TPDNGPQLVL QDVQHKLTLK ESYLGHTFSD KDKANLHKYG DMGRVAELVD KQSGQKFTGF IGVDKDTKTL TVLRADVIRP KIERMSHLKG VTLNGLQKQR LIEGKAVRLD NMTSKAGTAF SAYVRVSAAS RGLRFDHIPN GTPEKNGSKI APDTSGKHNT D
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