Gene Slin_6696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6696 
Symbol 
ID8715962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp55627 
End bp57042 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391451 
Protein GI284005631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.116311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTA GACCGATAGC GACCACACAG GGATGGGGTT CAATAGCACA GCAGATGCTT 
GATCTGGTAG GGGAGGCCTT TATTAAAGAG ATTCGGCAGC AACTTGCGAG TGACGAACCT
GTGGAAGGGT CAATCCAGTA TGTGTCGGAG ATGGATTCAA CTACTCAACC AGCTTCTATC
GAACTGAGAT TTGAGAATAC GTCTCATGCG CAGCATCTGT ACCACCGTTT AGCAAATGAT
CGCCAGCTAG ACGTGTACTG TACTCTCTCC TCGTCAGTTA GGTCTACGAT AAACCAATCC
AAACCGTGTG ACACACAAAA GGAACAGGGT ATTGACATAT ACATTTTCAA TGACCAATCG
GCGGTCGAAC TGACTGACGA GAGGTACCGT CGAGATGAAC CGCTTTTTTT TCCAGCAATG
AGGGCCATAA GCTGGCAAAA GCCTGTACTC TTGGTTGGTG ACCCCGATTG CCCTACAGAG
ATGAATCTGT ATCGGTTGGG TTATCGGGAA GCTATAAAAA TGCCTGAAAC CATACTTTAC
AGGCATTACG ACCCGAATAT GCCACTAGTT GGCTACGGCT ATGCGGACCG TCAATTTCAT
CTGACGGTTT TCAATAAAGG GCAATCTCCC AGGGTCGTTT CTATCCCCGA TAACTTATTA
GGAACAGGTC AGCTAGTGAA TCTGCGCCTG TCAAGCCCTG TTTCAACCGA ATCGATGGTT
GTGTCACCAT TAGGGGAGAA GCCAATAGTA AATCGTCAAG TCCAACCAGT AGTAGGAGAG
GCTCGATACC CAGATTCATT GCTCAAGCAG GCTACTCGTC AGTTTGCTGT CGAGCTGACA
GGCGAGAACG CAAAGCGATT GCTTAATGGG CAAAAAACGG ATGTCGTCAA AACAGGAGAT
GGCAGCATTG GAAAGCTGTA TGTGCTGAAT ACGCCAGATA ACGGCCCGCA ACTTGTGCTT
CAGGACGTCC AGCACAAGTT GACACTCAAA GAAAGTTACC TGGGACATAC CTTCTCCGAT
AAGGATAAAG CAAACCTCCA TAAGTATGGC GACATGGGCC GGGTTGCCGA ACTAGTTGAC
AAGCAGAGCG GCCAAAAGTT CACTGGCTTC ATTGGTGTAG ATAAAGACAC TAAGACACTA
ACCGTACTTC GCGCGGATGT GATCCGACCA AAAATTGAGC GGATGTCCCA TTTGAAAGGC
GTAACACTTA ATGGCTTGCA AAAACAGCGG CTGATCGAAG GAAAGGCCGT TCGGCTCGAT
AACATGACGA GTAAAGCCGG CACAGCTTTT TCGGCCTACG TGCGTGTATC AGCGGCAAGC
CGAGGCCTGC GTTTCGACCA CATCCCAAAT GGTACACCCG AAAAAAACGG TTCGAAAATC
GCGCCTGACA CCAGCGGAAA ACACAATACG GATTAG
 
Protein sequence
MQIRPIATTQ GWGSIAQQML DLVGEAFIKE IRQQLASDEP VEGSIQYVSE MDSTTQPASI 
ELRFENTSHA QHLYHRLAND RQLDVYCTLS SSVRSTINQS KPCDTQKEQG IDIYIFNDQS
AVELTDERYR RDEPLFFPAM RAISWQKPVL LVGDPDCPTE MNLYRLGYRE AIKMPETILY
RHYDPNMPLV GYGYADRQFH LTVFNKGQSP RVVSIPDNLL GTGQLVNLRL SSPVSTESMV
VSPLGEKPIV NRQVQPVVGE ARYPDSLLKQ ATRQFAVELT GENAKRLLNG QKTDVVKTGD
GSIGKLYVLN TPDNGPQLVL QDVQHKLTLK ESYLGHTFSD KDKANLHKYG DMGRVAELVD
KQSGQKFTGF IGVDKDTKTL TVLRADVIRP KIERMSHLKG VTLNGLQKQR LIEGKAVRLD
NMTSKAGTAF SAYVRVSAAS RGLRFDHIPN GTPEKNGSKI APDTSGKHNT D