| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6695 |
|---|
| Symbol | |
|---|
| ID | 8715961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013731 |
|---|
| Strand | - |
|---|
| Start bp | 54166 |
|---|
| End bp | 55533 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391450 |
|---|
| Protein GI | 284005630 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.681272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.16594 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACTA CTAAGCCGCA GTTATCCGAC TATAAGCAGC AGATTGACCT GGTGCAGTTT
CTGGAGACAG AGGGCTTCTC GAAGGATCGG CGAAAATCGA CCCGGCGCTG GCCAGTACTC
GAAAACGCCG AAGGTCGAAA ACTCATTATC GGCAACAATC AAAAAACAAA CGAATATTTT
TATTACAACC CTGAAGATAG CCGTGACCGG GGGACGATTG TTGATTATGT GATTGACAAA
CTCCATATCG ACACGGCAAC GCGGGAAGGC TGGCAACAGC TTCACGAATT TATAGGTCGG
TACGCCGGTG ATTTGTCACA CCTCGCTAAA AGCCGTTCTA CCGATCTGGT TGAAAGTCAA
CCGCCTTCTG ACACGAGCCG GAGTAAGGCG ATGTCCCATT ACTTCAGACT TGATCCACTA
ACCAATACGG ATTATCTCAT GGACAGGCGA GGCTTAACGG TCGACACACT TGGCCACCGG
GCATTCATCG GCAAAATCTT TAATAAGACG TTTATAAGCA AGAAAACTGG GGAAACGGTC
ATCAATACAG TGTTTCCGAT GGAGAGTGAA CAGGGCATTA CGGCCATTTT GCTGAAAAAC
GACAGTCCAA CGGGTTTAGT GAATGGGCAT ACATGGGGCG AGCGCCTGGA AAGTATCTGG
GTGTCGAACC TGCCAAAAGG TCATCAGCCT AAGGAAATGT TGATTTGTGA AAGTCCGATT
GACGCCTTAT CGTATCACCA GCTTCACCCA CCGAAGGAAC CCTATGACCG GGTCTATGTT
GCTACAGGTG GGCAACCTTC TTCACTTCAG CCCCTAACAG TACAACGGCT GATAGACCGG
GTCAAACCTG AACTGGTTAT CTTGGGCCAC GACAATGATA ACAGCGGTAT TCGGTTCAAT
ATTGGTTGGG TCGGCCGACT TCAAGTTCCA GGCCAATCTA TTGAGCAGGC GAATCACCAG
TTAAGTATCA GTCACAATAA GAACAGTAAC ACCCTGTCTA TTGACGTATA TGGGTTACCG
GATGAAGTTG TAAAGCGGAA GCCGCACCTG GAGTCGCTTC AGGAAAAGGT ATTGACAACC
CTAAACAAAG GGTACACGCC CGATATGAAC AGAGCAAGCG CGGATGCCAT GATGCATCAG
GGAAACCATA GTTTGCTGAC TATTCACCTA CCTAACCACC GCCCAATGCT GACCCGGATA
GAAAAACTGG CCGTCGAATG GCGGGGGCTT ACCGACAAAT TGGTTATCAA ACGCCCCTTT
TCAAAGGATT GGAACGAGGA ATTACAATCA CAAAAAGCAA AAGTCGACCG GCCAGAACCC
ACTCTGAAGA ACCCATCTTA TAAAGCTACT CCACAAAAAT TAATATAG
|
|---|
| Protein sequence | MLTTKPQLSD YKQQIDLVQF LETEGFSKDR RKSTRRWPVL ENAEGRKLII GNNQKTNEYF
YYNPEDSRDR GTIVDYVIDK LHIDTATREG WQQLHEFIGR YAGDLSHLAK SRSTDLVESQ
PPSDTSRSKA MSHYFRLDPL TNTDYLMDRR GLTVDTLGHR AFIGKIFNKT FISKKTGETV
INTVFPMESE QGITAILLKN DSPTGLVNGH TWGERLESIW VSNLPKGHQP KEMLICESPI
DALSYHQLHP PKEPYDRVYV ATGGQPSSLQ PLTVQRLIDR VKPELVILGH DNDNSGIRFN
IGWVGRLQVP GQSIEQANHQ LSISHNKNSN TLSIDVYGLP DEVVKRKPHL ESLQEKVLTT
LNKGYTPDMN RASADAMMHQ GNHSLLTIHL PNHRPMLTRI EKLAVEWRGL TDKLVIKRPF
SKDWNEELQS QKAKVDRPEP TLKNPSYKAT PQKLI
|
|---|
| |