Gene Slin_6688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6688 
Symbol 
ID8715954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp50470 
End bp51393 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391443 
Protein GI284005623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.345618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.278313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTA AGTTACCTGA CGAATTAAGT CCGCAGGAAA TTAACCGGCT TCTGGCAGTC 
TTAACTTCCT ATTTTGATCA CGATCGAATC TCTACAAATG TGGTATTTAA GAGTGGCCAC
AGAAGGCTCG AGCAACCACA ATTACGTTTG TATGCCCATT ATCCGTCAAT CTACTGCACT
AAATGGCGTA TATTTGGCGG GGCTACCGTT GGCCGAGCAA CGTCAGGCCG GGCCGCGTCA
GGCTGTAGTA TGCTTGGCTC GAATCGCCAA TTTATGCAGC AGGAGATTTC ATTAAACGAC
TTACAGGCTA ACCAATCTGT CAATGCCTTT GCGGTGATAG ATGATTACCG GATCTTGGTG
GATAACGCAC AAGCTGTTGT TCATTTTTAC AAAGGACGAA GGGAGTGGGG AAGACTTGTT
AGAAGCGTTC CCATTGAAAA ATGGTCAGGA GATTGGTTAA TCAGGACAAT CGGTCGATTT
TTTCGGCTCG ATTACCAGTT GGCCGACGAT AAGGCAATTG CATCCATCCA GCGGAATGGG
TACTTGACCG TACATACAGA ACACCGCATT GCTGGAGCCG TTCTATACCA ACGTGCGTTG
AAAGGTGAAT TTTGGGATTA CTGCGTAAGC TACCGTGGCG ATGTGGGATT TGGGGTGACA
GTTAGAACAG CCATAGCAGA TTTGCGAGCT AAGTTGGCTA CTCGAACCAA CGTCGAACAA
GCTGAAATCG CGCTAAAAGT TGGCTCAGCC AGTCGATTTA CTCAGCAGCA GTTAGAGGCC
TTTTGTGAAG CGAATGGTTT GATGCCAGGT AGTCATTACA CACGCCAGCA ACTTCGCCAA
ACTGTTCTTC GTCAGCGGAA ATTGAACTGT GAACAGTTTC GCAACCAGCT CTCGTACTTC
GATATCCGCA TCAACTGTAA ATAA
 
Protein sequence
MRTKLPDELS PQEINRLLAV LTSYFDHDRI STNVVFKSGH RRLEQPQLRL YAHYPSIYCT 
KWRIFGGATV GRATSGRAAS GCSMLGSNRQ FMQQEISLND LQANQSVNAF AVIDDYRILV
DNAQAVVHFY KGRREWGRLV RSVPIEKWSG DWLIRTIGRF FRLDYQLADD KAIASIQRNG
YLTVHTEHRI AGAVLYQRAL KGEFWDYCVS YRGDVGFGVT VRTAIADLRA KLATRTNVEQ
AEIALKVGSA SRFTQQQLEA FCEANGLMPG SHYTRQQLRQ TVLRQRKLNC EQFRNQLSYF
DIRINCK