Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6688 |
Symbol | |
ID | 8715954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | - |
Start bp | 50470 |
End bp | 51393 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391443 |
Protein GI | 284005623 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.345618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.278313 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACTA AGTTACCTGA CGAATTAAGT CCGCAGGAAA TTAACCGGCT TCTGGCAGTC TTAACTTCCT ATTTTGATCA CGATCGAATC TCTACAAATG TGGTATTTAA GAGTGGCCAC AGAAGGCTCG AGCAACCACA ATTACGTTTG TATGCCCATT ATCCGTCAAT CTACTGCACT AAATGGCGTA TATTTGGCGG GGCTACCGTT GGCCGAGCAA CGTCAGGCCG GGCCGCGTCA GGCTGTAGTA TGCTTGGCTC GAATCGCCAA TTTATGCAGC AGGAGATTTC ATTAAACGAC TTACAGGCTA ACCAATCTGT CAATGCCTTT GCGGTGATAG ATGATTACCG GATCTTGGTG GATAACGCAC AAGCTGTTGT TCATTTTTAC AAAGGACGAA GGGAGTGGGG AAGACTTGTT AGAAGCGTTC CCATTGAAAA ATGGTCAGGA GATTGGTTAA TCAGGACAAT CGGTCGATTT TTTCGGCTCG ATTACCAGTT GGCCGACGAT AAGGCAATTG CATCCATCCA GCGGAATGGG TACTTGACCG TACATACAGA ACACCGCATT GCTGGAGCCG TTCTATACCA ACGTGCGTTG AAAGGTGAAT TTTGGGATTA CTGCGTAAGC TACCGTGGCG ATGTGGGATT TGGGGTGACA GTTAGAACAG CCATAGCAGA TTTGCGAGCT AAGTTGGCTA CTCGAACCAA CGTCGAACAA GCTGAAATCG CGCTAAAAGT TGGCTCAGCC AGTCGATTTA CTCAGCAGCA GTTAGAGGCC TTTTGTGAAG CGAATGGTTT GATGCCAGGT AGTCATTACA CACGCCAGCA ACTTCGCCAA ACTGTTCTTC GTCAGCGGAA ATTGAACTGT GAACAGTTTC GCAACCAGCT CTCGTACTTC GATATCCGCA TCAACTGTAA ATAA
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Protein sequence | MRTKLPDELS PQEINRLLAV LTSYFDHDRI STNVVFKSGH RRLEQPQLRL YAHYPSIYCT KWRIFGGATV GRATSGRAAS GCSMLGSNRQ FMQQEISLND LQANQSVNAF AVIDDYRILV DNAQAVVHFY KGRREWGRLV RSVPIEKWSG DWLIRTIGRF FRLDYQLADD KAIASIQRNG YLTVHTEHRI AGAVLYQRAL KGEFWDYCVS YRGDVGFGVT VRTAIADLRA KLATRTNVEQ AEIALKVGSA SRFTQQQLEA FCEANGLMPG SHYTRQQLRQ TVLRQRKLNC EQFRNQLSYF DIRINCK
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