| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6684 |
|---|
| Symbol | |
|---|
| ID | 8715950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013731 |
|---|
| Strand | - |
|---|
| Start bp | 46631 |
|---|
| End bp | 47029 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_003391439 |
|---|
| Protein GI | 284005619 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.185489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.593771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATAC TGATTGATAC GCATATCCTA TTATGGGTGC TTGAAGCAGA CGATCAATTA
TCAGCTCGGG CAACGGAGTT GATCCGTAGT ACCATCAACG AAGTGTTTGT AAGTGCCGTA
TCTCTGCTTG AAATCTCCAT CAAGAAAAAG ATTGGCAAGC TGGACACTAC CCGAACGGCT
ACTGAAATCT CCCAGGAGAT GACCCGTGTG TTAGCCATTC AACTCCTGCC TGTCCTGCCT
CATCATTTAG ATGCCTATCA GTCGATCCCG CTGTATGAGG ATCACCGCGA TCCCTTCGAC
CGGTTATTAA TCGCTACGGC TTTTGCCGAT AACCTCACGT TGATATCTGA CGATAGCAAG
TTTGATCGGT ACACACCTTT CGTGACCTTG ATTCGATAG
|
|---|
| Protein sequence | MRILIDTHIL LWVLEADDQL SARATELIRS TINEVFVSAV SLLEISIKKK IGKLDTTRTA
TEISQEMTRV LAIQLLPVLP HHLDAYQSIP LYEDHRDPFD RLLIATAFAD NLTLISDDSK
FDRYTPFVTL IR
|
|---|
| |