Gene Slin_6680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6680 
Symbol 
ID8715946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp39855 
End bp41789 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content43% 
IMG OID 
ProductDNA methylase N-4/N-6 domain protein 
Protein accessionYP_003391435 
Protein GI284005615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000759129 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAG ATCTTAACCT CAACGTCCGC ACCAAACAAG AAGACGTTAC AGTAGAAAAG 
TATCAATTCG AGCAACCTAT AAAAGGTTAT CCTGAGCTTA GGTGGCAAGG GAAACGGCCA
TTTACAACTA CACAGTTTTA CCCGGCCCAA CTCAAAGAAA CTTATGGTGA AGAAACGGAT
GGCTGGATGA ACCAAATCTT CTGGGGTGAT AATCTCCAAG TTATGAGTCA TCTGTTGAAG
AAATTCCGGG GCCAAGTTGA TTTGATATAT ATCGACCCTC CATTTGATTC TAAAGCAGAT
TATAAAAAGA AGATTCAGCT ACGTGGTAAG GATATCATGA ACGATGCCAC AAGTTTTGAA
GAAAAGCAAT ATACGGATAT TTGGACGAAT GACGAGTACT TGCAATTTAT GTACGAGCGA
CTTATAATAC TCAAGGAATT ATTGTCCGAA AAAGGCAGTA TTTATGTTCA TTGCGACTAT
CATAAAAGCC ATTACATCCG CAGTCTATTG GACGAAATTT TTGGACAGAA TAACTTCTTA
AATGAGATTG TTTGGAAAAG AACAGCCGCG CATAGCGATG CTAAACAAGG TGCAAAATTC
TTTGGACGAC AACACGACAT AATTTTTTAT TACTGTAAAA GCTTAAATTA CATTTGGAAT
CAGCAATATA TACCATACAG CGATGATTAT ATAAAGCAAA ATTATCGCAT GAAAGATGAA
GACGGAAGAG CTTTTCAAAC GGTTGATTTA ACTGCAAGAA AACCGGGAGG AGATACTTCC
TATGAATGGA AAGGATATAC GTTAAGTAGC GGTAGATATT GGGCATATTC TAAAGCAAAT
ATGGAAAAGT TTGAGCAGGA AGGGAAAATT TATTACACAA GTAGCGGTTT ACCCAGACTG
AAATATTATC TCGACGAAAT GCCCGGAGTT TCACTTCAAG ATATGTGGAC GGATGTAAAA
CTGTTAAGTT CACATTCAGG AGAACGAGTT GATTATCCAA CTCAAAAACC TGAAACCCTA
CTCGAAAGAA TAATTCAAGT TTCCTCTAAC CCAGGCGACC TTGTCTTCGA TTGCTTTATG
GGTAGCGGTA CTACGCAGTC CGTAGCTATG AAACTAGGTC GACGGTTCAT TGGAGCAGAT
ATTAACCTAG GTGCTATTCA GACCACAACG AAACGACTCA TTAAAATTGC AAACGAGTTA
AATGGCAAAG TGAACGACGG TACTGTTTAT ACGGGGTTTC AAGTATATAA TGTCAATCAT
TACGACGTTT TTCGAAATCC GCTCGAAGCA AAAGAACTGC TAATGAAGGC ACTTGAAGTT
GAACCCGCTC CGGGTGGTGG GCTGTTCGAC GGTGAGAAAG ATGGGCGGCT GATTAAAGTA
ATGCCCGTCA ACCGGATTGC AACCCGCGCT GATCTGAATG AACTGCTCAG CAACATAGAC
CTTAGAGCTT ACGAGAAAAA GAAGTCCGAA GCCCCAAACC GGCCCGTTGA ACAAATTACG
CTCATCTGCA TGGGGCATGA ACCTGACTTG GCAGCCCAGC TCAAAAATGA GATAAAAACG
ATGGGTTATG CAGTCGACGT AGAAGTGGTC GATGTGTTAC GCGACCGTTC CAAGCTGGAG
TTCAAACGGG ACGCCGAAGC GGAGATCAGC ATCGAAAACA ACCAACTCCT CATCCGAGAG
TTCTTCCCCA TGAACCTCCT GCAAAAGCTT TCGCTCATGA AAGAAGACGT AGGCAACTGG
AAAGAGCTGG TCGAATCGGT CCTGATTGAC TGGAACTACG ACGGAGCTGT ACTCGAACCA
GCAACGGTCG ATATTCCCGA GGGGAGCAAC CTTGTTCGGG GTGTCTACCC GGTTCCTGCT
AACCATGGTA CAATCCGGGT GAAGATAACG GATCTGCTAT CTGAATCGCT CGAACAAACC
GTAACGATTT ACTAA
 
Protein sequence
MQTDLNLNVR TKQEDVTVEK YQFEQPIKGY PELRWQGKRP FTTTQFYPAQ LKETYGEETD 
GWMNQIFWGD NLQVMSHLLK KFRGQVDLIY IDPPFDSKAD YKKKIQLRGK DIMNDATSFE
EKQYTDIWTN DEYLQFMYER LIILKELLSE KGSIYVHCDY HKSHYIRSLL DEIFGQNNFL
NEIVWKRTAA HSDAKQGAKF FGRQHDIIFY YCKSLNYIWN QQYIPYSDDY IKQNYRMKDE
DGRAFQTVDL TARKPGGDTS YEWKGYTLSS GRYWAYSKAN MEKFEQEGKI YYTSSGLPRL
KYYLDEMPGV SLQDMWTDVK LLSSHSGERV DYPTQKPETL LERIIQVSSN PGDLVFDCFM
GSGTTQSVAM KLGRRFIGAD INLGAIQTTT KRLIKIANEL NGKVNDGTVY TGFQVYNVNH
YDVFRNPLEA KELLMKALEV EPAPGGGLFD GEKDGRLIKV MPVNRIATRA DLNELLSNID
LRAYEKKKSE APNRPVEQIT LICMGHEPDL AAQLKNEIKT MGYAVDVEVV DVLRDRSKLE
FKRDAEAEIS IENNQLLIRE FFPMNLLQKL SLMKEDVGNW KELVESVLID WNYDGAVLEP
ATVDIPEGSN LVRGVYPVPA NHGTIRVKIT DLLSESLEQT VTIY