Gene Slin_6676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6676 
Symbol 
ID8715942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp34303 
End bp35085 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content40% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003391431 
Protein GI284005611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000780736 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGT ATTCTTTCAA TGGTCTGCAG CAATACTTAG ATCAAAAAGG CTTTCCTAAA 
ACGAGTGCCG GAACATTTCA GCTATTGAAA CGTGACCTGC TGAAAGGAAT GCAGCAGGGC
GACATCGTAA TTCGGTCCGA TGGGATTTAT TGTACGATAG ACGGCCAAGA ATACAAAGGG
TACATTTTTA ATCAAAAACC CAATATTAGT CGCTTTGGAG AGCCCAAATT CCATACAGCG
GATTGTGAGA TAGTAGAAAA GCGACAGAAG CTTCATGGAG ATTATGTCTT TACTACATTA
GAAAATGTAC AATTGTATGA TTCAGGGCAG GGAGGAGCTC CTTACCCTAA AAAAGATGTT
TATACTATTT TAAAATTGTG CGGCTATTGT CGTCAACTCA TAGGCGCACA AAATGAAGGG
ATTGTAGACA CAGAAGATTT TTATGCTATG TTGGTCGAGC AGTATGGTTC AGCAGCCGAA
CCCGATAACA GTGTCGTTGA TATTTTTGGA TATACCCCCG ATTTTTCTTT AATCAGCAAA
AAAATCAGGG AAGCAAAGGC ATACAAATGT GAGAAGTGCT CAATTGATTT GTCTGCCGTA
ATGGATCGAC ACTTCTTGCA TGTACATCAC CGGAACGGAC GCAAAACTGA TAACAGACCA
CAGAATTTAC AATGTCTATG TATTCGTTGC CATGCTTCAG TTGATGATAG GCACAAAGAG
AATTTTGCTA CTGTTAACAA AGAACGTGAG TTAGCTATAT TTATAAAGAA GTTCCCAAAA
TAG
 
Protein sequence
MTLYSFNGLQ QYLDQKGFPK TSAGTFQLLK RDLLKGMQQG DIVIRSDGIY CTIDGQEYKG 
YIFNQKPNIS RFGEPKFHTA DCEIVEKRQK LHGDYVFTTL ENVQLYDSGQ GGAPYPKKDV
YTILKLCGYC RQLIGAQNEG IVDTEDFYAM LVEQYGSAAE PDNSVVDIFG YTPDFSLISK
KIREAKAYKC EKCSIDLSAV MDRHFLHVHH RNGRKTDNRP QNLQCLCIRC HASVDDRHKE
NFATVNKERE LAIFIKKFPK