Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6676 |
Symbol | |
ID | 8715942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | - |
Start bp | 34303 |
End bp | 35085 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | HNH endonuclease |
Protein accession | YP_003391431 |
Protein GI | 284005611 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000780736 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGT ATTCTTTCAA TGGTCTGCAG CAATACTTAG ATCAAAAAGG CTTTCCTAAA ACGAGTGCCG GAACATTTCA GCTATTGAAA CGTGACCTGC TGAAAGGAAT GCAGCAGGGC GACATCGTAA TTCGGTCCGA TGGGATTTAT TGTACGATAG ACGGCCAAGA ATACAAAGGG TACATTTTTA ATCAAAAACC CAATATTAGT CGCTTTGGAG AGCCCAAATT CCATACAGCG GATTGTGAGA TAGTAGAAAA GCGACAGAAG CTTCATGGAG ATTATGTCTT TACTACATTA GAAAATGTAC AATTGTATGA TTCAGGGCAG GGAGGAGCTC CTTACCCTAA AAAAGATGTT TATACTATTT TAAAATTGTG CGGCTATTGT CGTCAACTCA TAGGCGCACA AAATGAAGGG ATTGTAGACA CAGAAGATTT TTATGCTATG TTGGTCGAGC AGTATGGTTC AGCAGCCGAA CCCGATAACA GTGTCGTTGA TATTTTTGGA TATACCCCCG ATTTTTCTTT AATCAGCAAA AAAATCAGGG AAGCAAAGGC ATACAAATGT GAGAAGTGCT CAATTGATTT GTCTGCCGTA ATGGATCGAC ACTTCTTGCA TGTACATCAC CGGAACGGAC GCAAAACTGA TAACAGACCA CAGAATTTAC AATGTCTATG TATTCGTTGC CATGCTTCAG TTGATGATAG GCACAAAGAG AATTTTGCTA CTGTTAACAA AGAACGTGAG TTAGCTATAT TTATAAAGAA GTTCCCAAAA TAG
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Protein sequence | MTLYSFNGLQ QYLDQKGFPK TSAGTFQLLK RDLLKGMQQG DIVIRSDGIY CTIDGQEYKG YIFNQKPNIS RFGEPKFHTA DCEIVEKRQK LHGDYVFTTL ENVQLYDSGQ GGAPYPKKDV YTILKLCGYC RQLIGAQNEG IVDTEDFYAM LVEQYGSAAE PDNSVVDIFG YTPDFSLISK KIREAKAYKC EKCSIDLSAV MDRHFLHVHH RNGRKTDNRP QNLQCLCIRC HASVDDRHKE NFATVNKERE LAIFIKKFPK
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