Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6667 |
Symbol | |
ID | 8715934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | + |
Start bp | 25870 |
End bp | 26940 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391423 |
Protein GI | 284005603 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGTCAG ATCATTTTGC ATTCTTAGGA CAGAATATCC TGTTCCAACG TGACTCCTTA TCCCTGTGTG TATCAACTAA CGCTGACCCA CAGGCTGCCG AGCTACTTCA ACAGACGACC TACGGCACCG AAGGTATTCG CTACCGTCAA CTGGGTCAGG AAATTAAGCT AAAGCAACTC CACCAGCCCA ATTTCTTTCA TCTTTACGAC CAGACAGAGT TAATAGGATT ATATTGCCTG GACCAGCGGC CAATTGATTT CCCGGGTGCC ACGGTCAGTG GCTATTACGG TCGTTACCTG GCCGTGCGTG ACGATGCTCA AGGCAACGGA TACGGACAAC TACTTAAAAC GACTGCTGTT AATTACATCA GCCAAAACGT TTCAGGTCCT CTCCTATTTT ACTCATACAT TGAAAGCAAG AATAGCCGCT CCATGGCGGC TTCGCTTCGG GAAAATTTTG CGTCGGTGGC TCGACTTAAA ACATTCATGT TCAGGCGATT CTCCCCCCAT ATGGATGAGC GTTTTAACGT GGTTTCAGTG GCGGATACCG ACAGCATTCT GAATGCAATC CGAAGGCAGT ATGCAGCCTA CGGTTTCACG AATTTTTTGA ACATCAATTA CCGAAACCAC TACTTTACCC TAAAAGAAAA TGGCCGCATC GTGGCTGGGA TTCAGGCCAA TCCAATCGTG TGGAAACTGA TCCATATCCC TGGTAAGTTG GGGCCATTTA TCCGGTATAT AGCCCCCTTT GTGCCAGGCC TCCGGCGGTT CTTCAACCCG TCGAGGCAGT CGTTCGTGGC TCTGGAAGGT GTTTTTATTG AGGACGGGCG AACAGATCTG TTACCCATTT TGCTGGAAAG TGTATTGTCC CATTTCAATG TCCATACCGC TATGTGGCAG ATTGACGAAA AAGATCCACT GATTAACCAA CTGAACAGCC GACAGATGGG CCGTCTCAGC CAGTTTCAGC CAGGGGTTAC AACGCATGTT ATGGTTAAGG CCGTTGACCT GCCTTCAAGC ATTGAATTGG GCAAAGCGCC AGCTTACGTT TCCAGTTTTG ACTACTCCTA A
|
Protein sequence | MKSDHFAFLG QNILFQRDSL SLCVSTNADP QAAELLQQTT YGTEGIRYRQ LGQEIKLKQL HQPNFFHLYD QTELIGLYCL DQRPIDFPGA TVSGYYGRYL AVRDDAQGNG YGQLLKTTAV NYISQNVSGP LLFYSYIESK NSRSMAASLR ENFASVARLK TFMFRRFSPH MDERFNVVSV ADTDSILNAI RRQYAAYGFT NFLNINYRNH YFTLKENGRI VAGIQANPIV WKLIHIPGKL GPFIRYIAPF VPGLRRFFNP SRQSFVALEG VFIEDGRTDL LPILLESVLS HFNVHTAMWQ IDEKDPLINQ LNSRQMGRLS QFQPGVTTHV MVKAVDLPSS IELGKAPAYV SSFDYS
|
| |