Gene Slin_6658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6658 
Symbol 
ID8715925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp18230 
End bp19480 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content49% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391414 
Protein GI284005594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.613149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.601016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTG ACTCCTTTAC CCGCCTGGTT GACGACTACA AACAAAACCC GAATCTGATT 
TACCAAAGTT GGTTTCTGCA CAATGAAGAC CGTCTGAAAG CCTTTCGCTC GATCCGGCGT
GGCGTCTTAC AAGTCATCAG TGACATTAAA GACGGTTCGT TTCCCAACGA TTTCAAAGGC
AGTTCTCTTG AGTTTGTGCT CACCTGCATC ACCGAGCAGA AACAGGTATT TGAAGGCGCG
TCGCATCCTT TCTACTGGAA ACCAAAGCTG CGTATTCCAG ATATTTATGA GAATCAGGAC
CACAAGCGCT ATTTCGGTCA GTTTCTGGAA TGCTGCCTGA AAGCCACCAA ACCCGAAACC
ATTGTCAACG AAATTCACAA ACTGGATGCG CATAAGATCA AAGGGTTGGG GCCGGCCGTA
GCCAGTATTC TTTATTTCCT GCATCCAACC TGGGTCCCCC CTTTTAATAC GGCGATCATT
AATGGCTATA ACCGACTCTT TAATGAGCGT CGGAAACTAG GATCGTGGTC GGAATACCTG
GCCATCCGCG AAAAGATGCT GACGGTAAAC AACGAGTATC GGTCTGTGCT GTCAAACGAC
CTGGGTGCCC TGGCGGGTTT GTTATTTGAG GTTGGAGCGG GTAACCTGCT GGTACCGGGA
CTGGCCGATC AACCGGCCGT TGATCGGGAA AAGCTTCAGA AACAGATAGA AAAACGCCAC
AAAGGTGTGG TTGATGAACA ACAGGAAGAA CATACGCACA GCGAGATGCA GTATCACCTG
CTAACCATTG GTCGGGCGCT GGGGTATGAC GTGGCCGCTG CCCGAAATGA CATGTCCCGT
CACTATAACG GACATTCGTT TTCCTTCCTG AGTTTACCTG CTCTACCTCC CCTACCCGTC
TCGGCTGAAA CGAGCCAAAC GATCAGCCTA ATTGACATTG TCTGGTTAGA AAAAGGTACC
GGTCGAATTA TCTGTGCCTT CGAGGTTGAG AAAAGCACGT CCATTTATTC CGGTATACTA
CGATTGACGG ATTTAATCTG TTCATTACCT GACCATGCCA CTGCGTTGTA TTTAGTGGTT
CCTGATAGTC GCAGGAAAGA GGTAGAAATT CAACTAACCC GCCCGTCAAT TAAGCAGACA
AACACGCCAA TTCGCTACAT GCTCATGTCT GAGCTTCGGA CCCATTGTGA TGCGTTATGC
AAATTTGGTG ATAGCCACCG GGTGTTGGAG AAGATTGCCC GCTCTGTGTA A
 
Protein sequence
MLADSFTRLV DDYKQNPNLI YQSWFLHNED RLKAFRSIRR GVLQVISDIK DGSFPNDFKG 
SSLEFVLTCI TEQKQVFEGA SHPFYWKPKL RIPDIYENQD HKRYFGQFLE CCLKATKPET
IVNEIHKLDA HKIKGLGPAV ASILYFLHPT WVPPFNTAII NGYNRLFNER RKLGSWSEYL
AIREKMLTVN NEYRSVLSND LGALAGLLFE VGAGNLLVPG LADQPAVDRE KLQKQIEKRH
KGVVDEQQEE HTHSEMQYHL LTIGRALGYD VAAARNDMSR HYNGHSFSFL SLPALPPLPV
SAETSQTISL IDIVWLEKGT GRIICAFEVE KSTSIYSGIL RLTDLICSLP DHATALYLVV
PDSRRKEVEI QLTRPSIKQT NTPIRYMLMS ELRTHCDALC KFGDSHRVLE KIARSV