Gene Slin_6649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6649 
Symbol 
ID8715916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp10347 
End bp10766 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391405 
Protein GI284005585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.164542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.314195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA AACCATACTC AGCAAGTGTT CTATCAGTGG CGGGATTCAT TCTGTCGGGC 
ATGGGTTTGT ACTTTATTAT CCTTCGGCCT CCTTTATTGC CTGAGGACCT GCACTACATG
GGAACATCTA TGCAGACAGT GAAACAGCAT TTACCTATGC TTCCATCTTG GTTGCAAAAG
GTTTTTTGGG TACTGGGCGG TCACCTGTTT ACCACCGGGT TGTTGACTGT TTTTATGGCC
CGCACTTCGT TTCGTACTCG CTCACCTGGG GTCGTTACCA TTACTATGCT AGCAGGGTTG
AGTTCAATTG GCTGGATGAC GATTGTCAAT TTTATAATTG GTTCAGACTT CATGTGGCTC
CTGCTGAGCT TCACATTTCC CTGGGTAGTA GCGTTGGTTC TCTACCGTCT GCGTATATAG
 
Protein sequence
MTLKPYSASV LSVAGFILSG MGLYFIILRP PLLPEDLHYM GTSMQTVKQH LPMLPSWLQK 
VFWVLGGHLF TTGLLTVFMA RTSFRTRSPG VVTITMLAGL SSIGWMTIVN FIIGSDFMWL
LLSFTFPWVV ALVLYRLRI