Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_R0043 |
Symbol | |
ID | 8729292 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6726840 |
End bp | 6728334 |
Gene Length | 1495 bp |
Protein Length | |
Translation table | |
GC content | 54% |
IMG OID | |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000158022 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.338692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGAGTTTGAT CCTGGCTCAG GATGAACGCT AGCGGCAGGC CTAATACATG CAAGTCGAAC GGGTCGCAAG GCCAGTGGCA AACGGGTGCG TAACGCGTAA GCAACCTGCC TCATACTGGG GGATAGCCCG GCGAAAGCTG GGGTAAACCC GCACGGTCCA GTTTCATCAC CTGGTGAGAT TGGTAAACAT TTATGGGTAT GAGAGGGGCT TGCGTCTGAT TAGTTAGTTG GCAGGGTAAC GGCCTACCAA GACGATGATC AGTAGGGGTT CTGAGAGGAT TGGCCCCCAC ATGGGTACTG AGATACGGAC CCAACTCCTA CGGGAGGCAG CAGTAGGGAA TATTGGGCAA TGGACGGAAG TCTGACCCAG CCATGCCGCG TGCAGGATGA AGGCGCTCAG CGTTGTAAAC TGCTTTTATT GGTGAAGAAC AGCAGTCCTG CGGGATTGTG TGACGGTAGC CAAGGAATAA GCACCGGCTA ACTCCGTGCC AGCAGCCGCG GTAATACGGA GGGTGCAAGC GTTGTCCGGA TTTATTGGGT TTAAAGGGTG CGTAGGTGGT CATTTAAGTC TGGTTTGAAA GCAGGCGGCT TAACCGTCTG ATGTGGCTGG AAACTGAATG ACTTGAATGG GTTGGCGGTA GCCGGAATGG GTCATGTAGC GGTGAAATGC ATAGATATGA CCCGGAACAC CGATTGCGAA GGCAGGCTAC TACGACTTGA TTGACACTGA GGCACGAGAG CATGGGTAGC GAACAGGATT AGATACCCTG GTAGTCCATG CCGTAAACGA TGATTACTGG CTGTATGTGT TCTAACATGT GTGGCTGAGC GAAAGCGTTA AGTAATCCAC CTGGGGAGTA CGCTGGCAAC AGTGAAACTC AAAGGAATTG ACGGGGGTCC GCACAAGCGG TGGAGCATGT GGTTTAATTC GATGATACGC GAGGAACCTT ACCTGGGCTA GAATGTGCGT GAAGGGTTCA GAAATGGGTC CGTGTAGCAA TACACACAAA ACAAGGTGCT GCATGGCTGT CGTCAGCTCG TGCCGTGAGG TGTTGGGTTA AGTCCCGCAA CGAGCGCAAC CCCTGTACTT AGTTGCCAGC GAGTAATGTC GGGAACTCTA AGTAGACTGC CTGCGCAAGC AGAGAGGAAG GGGGGGACGA CGTCAAGTCA TCATGGCCCT TACGTCCAGG GCGACACACG TGCTACAATG GTCGGTACAG CGGGTAGCGA GGGGGTAACC CGGAGCCAAT CTTGTAAAGC CGGTCACAGT TCGGATTGGG GTCTGCAACC CGACCCCATG AAGCTGGAAT CGCTAGTAAT CGCGCATCAG CCATGGCGCG GTGAATACGT TCCCGGACCT TGTACACACC GCCCGTCAAG CCATGGGAAT TGGGGGGACC TGAAGGTCGG TATGATAGCC GGGCAAGGGT AAACTCGGTG ACTAGGGCTA AGTCGTAACA AGGTAGCCGT ACCGGAAGGT GCGGCTGGAA CACCT
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Protein sequence | |
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