| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6636 |
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| Symbol | |
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| ID | 8730422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 8069267 |
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| End bp | 8072245 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003391392 |
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| Protein GI | 284041462 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.300178 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA CGTTTATGTA TGTACAGACG CTGGTCTGTC CACCCGCCCG CTGGCTGCTG
GCACTAGGGC TCTTTCTACT TAGTATAACC ATCCATGCCC AGACCACGGG CAGTCTCAGC
GGTTCCGTTA TCGATTCGGA AAACGGGCAG GGCCTGCCGG GTGTCAACGT AGTGGCCAAG
GGGTCATCGC GGGGCACTAC CACCGACGGA AACGGTCGCT ATCAGCTGAC CGGCATTCAG
CCCGGCACCG TTCTGGTATT CAGCTCCGTT GGGTACACCT CGCAGGAAGT AACCGTAGGA
AGTCAAACGA CCATCGACCT GCGCATGGTC AGCGATAACA AGAGCCTGAA CGAAGTGGTG
GTACTGGGCT ACACATCGAC CCGCCAGAAA ACCCTGACCG GCTCCGCGCA GGCCGTTAGT
GCAAAGGAAC TAAAAGACGT AACGGCCAAC AACGTGGGGC AGTTATTACA AGGGAAAGCT
GCCGGTGTAT TCGTGGGCAA TAGCTCCGGC GACCCGCGTG TGCCGCCCAA AGTGCTGGTT
CGGGGGATTG GTACCCTTAC GGCCAGTTCC AACCCGCTTT ACGTGGTCGA TGGCGTAATC
GGTGGCATTC CGAACCCCAG CGACATCGAA TCCATCACCG TGCTCAAAGA TGCGGCTTCT
ACCGCTTTGT ATGGCGCCCG GGCCTCCAAC GGGGTCATTG TTGTGACCAC CCGCCGGGGC
ACATCGGGCA AAACCCAGGT TACGGCCCGG CTGAACAAAG GCGTTGGTTA CCTGAGCCTG
GGCAATTTCA GGCTGCTTAA TGGGCAGGAG TTATATAGCC TTCAGAAAGG GGTCTACCAG
CGCGACCAGC CCAACGGCAA CGTCAATGAT TACTTGCCCA CCCCCGAAGC CAACGCCAAT
ACGAACTGGT TCGACATTGC CTTTCGACCG GCTACCAACA CCCTGGCGGA GCTTAGTGCA
TCGGGCGGCA GCGACAAAAC CCGGTTTTTC CTGAGCGGCA ACTATTATCA GGAAGAAGGT
ATTCTGAAAG GAACGGGCCT GAACCGGTTT GGCTTACGGC TTAATTTCAG CCATAACCTC
AGCGAGAAGT TCCGGGTGAG CCTGAATAGT GCCGGCACCT ATACCCGTGG GTACGACAAC
AGCAATGGCT CGCTGTACGG CGCCTACACC TACCTGCCCT ACGACGACCC GTACTACAAC
GGACAGCCGT ACAACCCGAT CACGGGTGCT AAAAAATGGT ACGGGCGCGA CAATGCCAAC
TTCGTGTACA ATCAGCCATT CAACACGTTC AAAGAAAATA CCTTTGCGGG AGATGTGCTC
TTTAAAGCCG AATACAACCT GCTGCCCTGG CTTTCGCTCT CGACAACTAA CCGCGCCCAA
ACCAATTATT ACGGCAGCGA AAGCAGTCAG GATTTGCGGG GTAATGCCGC AGCCGACGTG
CTGGGCCGGT TAACGGACTA CACCAGCCGC GACTATAACC TGCTCACCTC CAACCTGCTT
CGGTTCAGGC ACAGCTTCGG CGACGGGCAC AGTCTGGATG GACTGGCCGG TTATGAATAC
CAGACTTATT ATTTCGAATC GCTGGGGGCA ACGGGAAAGG GCATCTTCTC GGGGCTGAAT
ATTCTGGATG CGACCTCCCA GCCCGAAAGC ATCAACGGCA CCAAAACCGA TAATGCCTTT
GCGTCTTACC TGTTCCAGGC CAACTACGGC TATAAGGAAA AGTATCTGGT AACGACCTCG
TTCCGGCGGG ATGGCTCCTC AAAGTTCGGG CGCGACCGTA AATACGGCAA CTTCTACGCC
GTGGGCCTGA GTTGGATTGC CTCCAACGAA GCCTTTCTGA ACAACAACCC AACGCTGAAC
AACCTAAAAT TCCGGCTCAG CTACGGTACC ACAGGCAACG CCGACGGTAT CAATGACTAT
GCCTCGCAGG GATTGTATAA CCTCACGGGT CAGTATGCGG GAGTGCCCTC GGCCTATCCT
ACCCGCATCG AAAACCCCAA CCTGTCGTGG GAAGTGTCTA ACAACACCAA CTTCGGCGTG
GACGCTACCC TCTGGAACCG GCTAAACGTT ACCGTCGACC TCTATAACCG ACTGACGAAC
AACCTGCTGT TCAACCGGCC ATTGCAGGGA ACCAGCGGCT ATGCGTTCAT CACGGAAAAC
ATCGGAGCCG TACGCAATCA GGGACTTGAG GTGGTATTAT CGGCAGATAT CCTGCAAAAA
ACAGCCCTCA AATGGCGCAC CGAAGTGAAC GTAGGCATGA ACCGGAACGA ATTGACGGCC
CTCTATGGCG ACCGCACCTT CGTGGCCAAC GGGCAGCGTC CGTTTGCACT CGACAAGCCG
CTGAACAGTT GGTACATGCG TCGGTGGATG GGTGTCGATG CGCCCACCGG CGACCCCCTC
TGGCAAAAGG TCAATGCCGA TGGCACGACC GCCACGACCA ACAACTACAA TGAAGCCACG
CTTCAGTTCA TCGGCAGCAA CGCCAATCCG AAACTGTTTG GCGGTATTCG GCAGGTGCTC
AACTGGAAGA ACTTCGAGCT GAACGCTTTC TTCACCTATG CGGCTGGCGT GACGCTCTAC
AACGGCGACC GGAACCTATT CGACAACGAC GGGGCCTATG ACCGGTACAA CCTGATGGCC
CTGCAGGACG GCTGGAGTCG CTGGGAAAAA CCGGGCGACA TCGCCACCCA CCCGAAATAC
GTAATCGGCG GCAATAAAAA CGCCCAGCGT CCGTCGTCGC GTTTCCTCGA AAACGGCAAT
TACCTCCGGC TCCGCAACAT TAGCCTGAAC TACGACCTGC CCAAAGCATT GGCCAGCAAG
GCCCACCTCG GCAGCGTCCG GCTGACGGCT TCGGGCGATA ACCTGTTTAC GGTCACGAAA
TTCTCGGGTA TCGACCCGGA CGTGGCAGAA ACGGGTGAAG TGGGGACGAA ATATCCTTTC
AGCAAGAAAT TTGTCTTTGG CGTTCAACTC AGCTTTTAA
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| Protein sequence | MNSTFMYVQT LVCPPARWLL ALGLFLLSIT IHAQTTGSLS GSVIDSENGQ GLPGVNVVAK
GSSRGTTTDG NGRYQLTGIQ PGTVLVFSSV GYTSQEVTVG SQTTIDLRMV SDNKSLNEVV
VLGYTSTRQK TLTGSAQAVS AKELKDVTAN NVGQLLQGKA AGVFVGNSSG DPRVPPKVLV
RGIGTLTASS NPLYVVDGVI GGIPNPSDIE SITVLKDAAS TALYGARASN GVIVVTTRRG
TSGKTQVTAR LNKGVGYLSL GNFRLLNGQE LYSLQKGVYQ RDQPNGNVND YLPTPEANAN
TNWFDIAFRP ATNTLAELSA SGGSDKTRFF LSGNYYQEEG ILKGTGLNRF GLRLNFSHNL
SEKFRVSLNS AGTYTRGYDN SNGSLYGAYT YLPYDDPYYN GQPYNPITGA KKWYGRDNAN
FVYNQPFNTF KENTFAGDVL FKAEYNLLPW LSLSTTNRAQ TNYYGSESSQ DLRGNAAADV
LGRLTDYTSR DYNLLTSNLL RFRHSFGDGH SLDGLAGYEY QTYYFESLGA TGKGIFSGLN
ILDATSQPES INGTKTDNAF ASYLFQANYG YKEKYLVTTS FRRDGSSKFG RDRKYGNFYA
VGLSWIASNE AFLNNNPTLN NLKFRLSYGT TGNADGINDY ASQGLYNLTG QYAGVPSAYP
TRIENPNLSW EVSNNTNFGV DATLWNRLNV TVDLYNRLTN NLLFNRPLQG TSGYAFITEN
IGAVRNQGLE VVLSADILQK TALKWRTEVN VGMNRNELTA LYGDRTFVAN GQRPFALDKP
LNSWYMRRWM GVDAPTGDPL WQKVNADGTT ATTNNYNEAT LQFIGSNANP KLFGGIRQVL
NWKNFELNAF FTYAAGVTLY NGDRNLFDND GAYDRYNLMA LQDGWSRWEK PGDIATHPKY
VIGGNKNAQR PSSRFLENGN YLRLRNISLN YDLPKALASK AHLGSVRLTA SGDNLFTVTK
FSGIDPDVAE TGEVGTKYPF SKKFVFGVQL SF
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