| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6634 |
|---|
| Symbol | |
|---|
| ID | 8730420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 8066425 |
|---|
| End bp | 8067729 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | nb031; nematoblast specific protein |
|---|
| Protein accession | YP_003391390 |
|---|
| Protein GI | 284041460 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.119535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAC TCCATTGGCT ACAACTGGGC TGTTTGCTTC TGACAACGGT TGGCCCCGCC
ACCACCCGCC CTCATCATGA ACCGAACGAA GTACGGGTTC CGATTGGCGG CAATAGCTGG
GTGACCAACT CATCAGCGTC GGCGGCTACT ATCTCCAAAG AAGGCCTGAC AAACTGGTCG
AGCCAGGCCA GTACAGTCGA TACCTACGTG CGGATTGCCC GAACGGGCAC GCTGCACCTG
TCCATCAACC TGCGTGTTCC CGCAGGTAAG AGCCGACTGC GGATTACCTT GCTGGGAAAG
TCGAAGGACA TTGATGTTCA GGGCAACACG TTTATGGATT ACCCGCTTGG CCAGTGGACC
GTTCCGAAAG CGGGTTATAT GAAACTGACA TTGCAGGGCA TCAGCAAAAC GGGCGCAACC
TACGCCGACG TAACCGATTT TGGTATCAGT GGCCCAGCCG TCGATGAACA AACGGCTTTT
GTACGCAACA ACGAAGGCAA TTTTTTCTAT TGGGGTCGGC GCGGACCGTC GGTTCATTTA
CGTTACCCGA TCCCGGAGGG CGTCGACGCC GAATGGTTTT ATAATGAGAT AACCGTTCCC
AAAGGCAATG ATATCATTGG GTCGTATTAC ATGGCTAACG GCTTTGGCGA AGGGTATTTT
GGGATGCAGG TCAACTCATC CACCGAACGC CGAATCCTGT TTTCGGTCTG GAGTCCGTTT
CAGACCGATA ACCCCAGCCA GATTCCGGCC GACCAGAAAA TCCGGCTGGA TCGCAAGGGC
GAGCAGGTAG TCACGAATGA GTTCGGCAAT GAAGGCTCCG GCGGACAAAG CTTCCTGCGC
TATAACTGGG TAGCCGGACA AACTTACAGG TTTCTGCTGC ATGGCAAACC CGATACGGGC
GGTTACACAG CCTATACCGC CTATTTTATG CCAGCGAATG GCGCTCGCTG GCAACTGATC
GCCAGTTTTA AACGACCTAA AACGACAACC TATCTTAAGT CACTCTATTC CTTTCTGGAA
AATTTCACGC CCGAAACGGG CAACGTGCAG CGGGGGGGCG AATTCTCAAA CCAATGGATC
AGGAGCAAAG AAGGAAACTG GCAGGAGCTA ACGCAGGCGC AGTTCACGGG CGACAACACA
GCGAAGAAAG CGTACCGGAT GGACTTTGCC GGTGGACTTG CTCAGAATCA GCGTTTTTTT
CTGCGTAACT GCGGCTTCTT CGATACGTAC ACGCCCCTTA AAACGGACTA TACGAGACCA
GCTCAACATC AGGCACCGAC GATAGCGCTG GACCAACTCC CCTAA
|
|---|
| Protein sequence | MIALHWLQLG CLLLTTVGPA TTRPHHEPNE VRVPIGGNSW VTNSSASAAT ISKEGLTNWS
SQASTVDTYV RIARTGTLHL SINLRVPAGK SRLRITLLGK SKDIDVQGNT FMDYPLGQWT
VPKAGYMKLT LQGISKTGAT YADVTDFGIS GPAVDEQTAF VRNNEGNFFY WGRRGPSVHL
RYPIPEGVDA EWFYNEITVP KGNDIIGSYY MANGFGEGYF GMQVNSSTER RILFSVWSPF
QTDNPSQIPA DQKIRLDRKG EQVVTNEFGN EGSGGQSFLR YNWVAGQTYR FLLHGKPDTG
GYTAYTAYFM PANGARWQLI ASFKRPKTTT YLKSLYSFLE NFTPETGNVQ RGGEFSNQWI
RSKEGNWQEL TQAQFTGDNT AKKAYRMDFA GGLAQNQRFF LRNCGFFDTY TPLKTDYTRP
AQHQAPTIAL DQLP
|
|---|
| |