Gene Slin_6627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6627 
Symbol 
ID8730413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8058215 
End bp8058937 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content52% 
IMG OID 
Productgliding motility-associated ABC transporter permease protein GldF 
Protein accessionYP_003391383 
Protein GI284041453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.11106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCTA TTTTCCGTAA AGAGGTCAAC CAATTCTTCT CGTCGCCCAT CGCCTACATT 
ATCATGGGCG TATTTCTGAC AGCCGTAGGG CTATTGCTCT GGGTTTTTCC GGATACGAGT
CTGCTGGAGA ATGGGTATGC CGATATGGGT ACTTTTTTTA ACCTGACGCC CTACGTCATG
CTGTTTCTGG TACCTGCCAT CACCATGCGC TCCATCGCCG ACGAAGTGCG GACGGGTACC
CTCGAATGGT TGCTGACCAA ACCCGTCAGT CGGTGGGGGG TAGTAGGCGG CAAATTTCTG
GCGAGCTGGC TGCTTGTTGT CGTTACGCTG GTCCCCACGT TATTGTATTA CGTAACGCTG
TATCAGCTTG CTTCGCCCAT TGGTAATATC GACTCGGCGG GCGTATTCGG GTCGTATACG
GGCCTGGTGT TGCTGGCGGG GGTATTTGTC GCCATTGGCT TATGGGCTTC TTCGCTCAAC
GATAACCAGG TAGTAGCCTT TGTGCTGGGA GTTTTCTTTT GCTTTTTGCT CTATGTTGGC
CTGAGTGCCC TGGCGGGTCT GACCCTGTTT GGCGGGCTTT CGTATTATTT ATCGCTCTTC
GCGCTGGATG AACAATACCG GGCGCTGGGC CGGGGAATCA TCGACACTCG CAACGTTGTG
TATCTACTCA GTCTTATTAT CCTTTTTCTT CTTCTCACAG CCAACAGGCT GAAATCAACC
TGA
 
Protein sequence
MLAIFRKEVN QFFSSPIAYI IMGVFLTAVG LLLWVFPDTS LLENGYADMG TFFNLTPYVM 
LFLVPAITMR SIADEVRTGT LEWLLTKPVS RWGVVGGKFL ASWLLVVVTL VPTLLYYVTL
YQLASPIGNI DSAGVFGSYT GLVLLAGVFV AIGLWASSLN DNQVVAFVLG VFFCFLLYVG
LSALAGLTLF GGLSYYLSLF ALDEQYRALG RGIIDTRNVV YLLSLIILFL LLTANRLKST