Gene Slin_6626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6626 
Symbol 
ID8730412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8057646 
End bp8058167 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391382 
Protein GI284041452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.147449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAC AACCGTCTAC CGCTCGTGTA GCCCTGAAAT GGGGCGTTAT TTTTGGCCTC 
GTACTGATGG CTATTACGCT GGTTATGTAC CTCACCGACC AGACGACCAA TCCGTTGTTC
AGCGGACTGA CTTTAGGAGC CATGGTTGCC TTTCTGGTCC TTTCGATGCG GGAGTTTCGG
TCGTTGAATG GCGGGTATAT GGCCTACGGC GAAGGGCTCG GCCTTGGGGC ACTTACCTCG
GCTGTGGGCG GAATACTCTC CTCGGCTTTT ACTACTTTCT ACAACGTAGT CATTGACCCA
ACGGTGCAGC AGCGAGCTCT GGAAAAAGCC CGCGAGAAAC TGGAAGAACA GGGGTCTATG
TCCGACGAAG CCATCGATCA GGCTATGGAA ATGTCCGAGA AGTTCCAATC GCCGGGGTTT
ACCTTCATTG CTGGTGTGTT TGGAACGTTA ATTGTAGGCT TTCTTTTGTC GCTGATTGTG
GCTGCGTTTA TACGCCGGAA CAAAGCAAAT CCGTTTGATT AA
 
Protein sequence
MNEQPSTARV ALKWGVIFGL VLMAITLVMY LTDQTTNPLF SGLTLGAMVA FLVLSMREFR 
SLNGGYMAYG EGLGLGALTS AVGGILSSAF TTFYNVVIDP TVQQRALEKA REKLEEQGSM
SDEAIDQAME MSEKFQSPGF TFIAGVFGTL IVGFLLSLIV AAFIRRNKAN PFD