Gene Slin_6617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6617 
Symbol 
ID8730403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8041882 
End bp8042907 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content59% 
IMG OID 
Productoxidoreductase, putative 
Protein accessionYP_003391373 
Protein GI284041443 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG TCATTCTTAG TATCACCTTC AGTTTTTTAC TGACGCTGCC CGCTTTATCG 
CAGTGGCAAC CGCAACCCGT AACGACCGAT GCCAGTTTTC GGGCGGTTAG CGTGGCCAGC
CCGGATATAG CCTGGATCGG TGGCACAAAA GGCACCTTCG TCCGAACCGT CGACGGTGGG
AAAACGTGGC AAACCGGCAC CGTGCCCGAC GCCCAAACCT GCGACTTTCG CGATGTTCAG
GCTATCGACG CCCAAACGGC CTACCTCATG AGCGCCGGAC CTGCCGAACA GGGCCAGGCT
CGTATCTATA AAACGACCGA CGCCGGGCAG CACTGGACAC TTCTCTATCA GACGCAGCAG
AAAGGGGTGT TTTTCGATGG CATCGACTTC TGGGACGAGC AGCACGGCAT TGTTTTCAGT
GATCCCATTG ATGGGAAATG GGTCATGCTA ACTACTGACG ATGGGGGTAA AACCTGGCAG
CCGGTCTCAT TGGCGAGTCT GCCCCTGATG GAAACGAACG AAGCGGCCTT TGCCGCCAGC
GGTACCAGTC TGGTTGTGCA GGGCAAGCGA AATGTCTGGA TTGCGTCGGG TGGTGGTACG
TTCGGGCGGG TTTTCCGATC TACCGACCGG GGCCGTACCT GGACGGTCAG CAACACCCCG
CTCCCGGCGG GCGAAGCCAC GGGCCTGTTC GGTATGCGCT TTTTTACGAA CAAAATCGGC
GTTGTTGTTG GCGGTAACTA CAAAAAGGAA CAGTTACCCG GCGCGAATGC GGCCATCACC
CGCGATGGCG GGCAAACCTG GCAGTTGCTT ACCCCCACCG ACCCACCCGG CCTAAAAGAA
GCCGTTGCCC TGCTCCCCGG TGACCGGTTG CTCACCGTAG GTCCTTCCGG CACGAGCCTT
TCCGCCGATC AGGGCCAGAC CTGGCAGCGA CTCGACACCG ATGGCTTTCA TTCAGTAGCC
TGCGCCAAAG GCACATGTTA CGCCGTCGGT GCCAAAGGAA AAGTAGCCGT GCAGCGGTTT
AAATGA
 
Protein sequence
MKHVILSITF SFLLTLPALS QWQPQPVTTD ASFRAVSVAS PDIAWIGGTK GTFVRTVDGG 
KTWQTGTVPD AQTCDFRDVQ AIDAQTAYLM SAGPAEQGQA RIYKTTDAGQ HWTLLYQTQQ
KGVFFDGIDF WDEQHGIVFS DPIDGKWVML TTDDGGKTWQ PVSLASLPLM ETNEAAFAAS
GTSLVVQGKR NVWIASGGGT FGRVFRSTDR GRTWTVSNTP LPAGEATGLF GMRFFTNKIG
VVVGGNYKKE QLPGANAAIT RDGGQTWQLL TPTDPPGLKE AVALLPGDRL LTVGPSGTSL
SADQGQTWQR LDTDGFHSVA CAKGTCYAVG AKGKVAVQRF K