Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6599 |
Symbol | |
ID | 8730385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 8016575 |
End bp | 8017156 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003391355 |
Protein GI | 284041425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCT ACATCAAATA TATGGTCAGT ATGCGTTGTA AAATGATTGT ACAGGCCGCA CTCGATCAGC TCGGATTGGA GCATGAACCA GTCGAGTTAG GAGAGGTAGA ACTTAAAACA GAAATTATAA GTGAACAGCG GGATGAATTG AACCGCATTT TGGTGAAAGT AGGCCTCGAA TTGATGGATA ATCGGAAAGC TATACTGATT GAACGAATAA AGGCAGTCAT CATTGACCTC GTTCATTATG CCAGTGAATT GCCTAAAATT AATAACTCTA ACTACATCAG CGAGAAACTA CACTATGATT ACACATACCT GGCTAACCTG TTCTCAGAGG TAACGGGTTC CACCATTGAG AAGTATATCA TCAATCAGAA AATTGAAAAG GTAAAGGAAT TGATACTTTA TGATGAGCTT AATCTTACCC AAATAGCCAA CAAACTGAAT TATAGTAGCG TAGCGCATCT ATCCAACCAG TTCAAAAAAG TAACAGGCGT GACGCCCCGT TCTTATAAAC AACTCTCGGC TAATAAGCGA ATTGGGCTTG AAAATGTAGG GGTTTTGGTA CCGTTTAGTT AA
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Protein sequence | MKLYIKYMVS MRCKMIVQAA LDQLGLEHEP VELGEVELKT EIISEQRDEL NRILVKVGLE LMDNRKAILI ERIKAVIIDL VHYASELPKI NNSNYISEKL HYDYTYLANL FSEVTGSTIE KYIINQKIEK VKELILYDEL NLTQIANKLN YSSVAHLSNQ FKKVTGVTPR SYKQLSANKR IGLENVGVLV PFS
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