Gene Slin_6599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6599 
Symbol 
ID8730385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8016575 
End bp8017156 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content39% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003391355 
Protein GI284041425 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT ACATCAAATA TATGGTCAGT ATGCGTTGTA AAATGATTGT ACAGGCCGCA 
CTCGATCAGC TCGGATTGGA GCATGAACCA GTCGAGTTAG GAGAGGTAGA ACTTAAAACA
GAAATTATAA GTGAACAGCG GGATGAATTG AACCGCATTT TGGTGAAAGT AGGCCTCGAA
TTGATGGATA ATCGGAAAGC TATACTGATT GAACGAATAA AGGCAGTCAT CATTGACCTC
GTTCATTATG CCAGTGAATT GCCTAAAATT AATAACTCTA ACTACATCAG CGAGAAACTA
CACTATGATT ACACATACCT GGCTAACCTG TTCTCAGAGG TAACGGGTTC CACCATTGAG
AAGTATATCA TCAATCAGAA AATTGAAAAG GTAAAGGAAT TGATACTTTA TGATGAGCTT
AATCTTACCC AAATAGCCAA CAAACTGAAT TATAGTAGCG TAGCGCATCT ATCCAACCAG
TTCAAAAAAG TAACAGGCGT GACGCCCCGT TCTTATAAAC AACTCTCGGC TAATAAGCGA
ATTGGGCTTG AAAATGTAGG GGTTTTGGTA CCGTTTAGTT AA
 
Protein sequence
MKLYIKYMVS MRCKMIVQAA LDQLGLEHEP VELGEVELKT EIISEQRDEL NRILVKVGLE 
LMDNRKAILI ERIKAVIIDL VHYASELPKI NNSNYISEKL HYDYTYLANL FSEVTGSTIE
KYIINQKIEK VKELILYDEL NLTQIANKLN YSSVAHLSNQ FKKVTGVTPR SYKQLSANKR
IGLENVGVLV PFS