Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6598 |
Symbol | |
ID | 8730384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 8013626 |
End bp | 8016055 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003391354 |
Protein GI | 284041424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCGC TTACCCGACA GTATGACTGG TCAAAGACAT CACTGGGTAC ACCCGACCAC TGGCCGCAAA GCCTGCGGGC CACGTTGAGT ATTATTCTAA ACGCCCGGTT TCCCATGTTT TTGTGGTGGG GATCGGAACT GATTCAGTTT TACAATGATG CTTACCGGCC CAGTTTAGAC CAAAACGGTA AACATCCTAC TGCCCTCGGC CAGAAAGGAC CGGATTGCTG GCCGGAAACA TGGTCGACTA TTTATCCCCT GATCAGGCAG GTATTGGACG GAGAAGAGGC CCCCTGGGGG GAGGACCAGC TCATTCCCAT CTATCGGAAC GGAAAGCTTG AAAATACCCG CTGGACATTT AGTTACAGTC CCGTTAAGGA TGAGTCCGGC AAGGTAGCAG GTGTGCTGGT TACCTGCTTC GAAACTACCC AGAAAGTGCA GGGCTTCAAT CGACTGCAAG CCTCCGAGCA ACGTTTTCAG CAACTGGTGC AAAAAGCGTC GGTAGGCATT GCTGTGCTGA GTGGCCCGGA CCTGAATATA GAGATCGTTA ACGAGGCTTA TGCTCAACTC GTTGGGCGCC GTCCGGACAG CTTACAGGGA AACCGCTTTT TCGATGTCGT TCCCGAAGCC CGGCCCGATC TCAGCCCCTT CATTGAGCAC GTCAAGCGAA CCGGCGAATG CCTGTACCGC TACGATCACC CCTATGTTTC GGTCGTTGAG GGATCGAAAA AGGAAGGTTA TGTAAATCTA ACCGTTCAGC CTTATAAGGA ACCGGACGAT ACCATTAGCG GGATCATTCT GCTTTGCCAG GATGTGACCG GGCAGGTACT ATCCCGACAG GATCTGGAAG CCAGTGAAGC CAAATTTCGC ACCCTCATCG AGCAGGCTCC CGTTGCTACC TGCCTGTTCG TAGGTCCCGA AATGCGGATT GACCTTGCCA ATGAATCCAT GATCACCTTC TTCGGGCAGG GTCCTTCCAT TGTGGGCAAA CCCATTCGGG AGGTGTTGAA AAGACCGGTA GACACCCCAG CTATCCAGCT CCTGGATAAC GTATTTACTA CAGGTAAGTC ATTTGATGCC AAGGAAGCAC CCGCCGATCT GGTTATCAAT GGCGTACCCG GAACCTACTA TTTTGACATT AGTTTGAAGC CGTTGCGCAA TGCCGCTGGC GAAATCTATG CGGTGCTGGA AATGGCCGTT GAGGTGACAC AGGAAGTGCT GGCCCGAAAA CAACGACTGG AAAGCGAAGC CTACTTTCGC CGGTTGACGG ATGCCGTACC CGCCATTATG TGGGAAACGC AGCCCGACGG GTACTGCACC TACCTCAACA AACAGTGGCA CGAAACCACC GGCCAGACTA CCGACGAAGC CCAGGGGTTT GGCTGGCTCG ACGCTACCCA CCCCGACGAC AAGGCCGAAA CGAGTAGAGT CTTCCTTGAG GCTAACCAGA ACCAGGCCTC CTTTCAGGCA CTCTACCGCT TACGCCAGCG CGATGGGCAG TACCGCTGGG CAATTGACCT GGGTAGTCCC CGCTTTGCAG CAGATGGCAC CTATGCCGGG ATGATTGGTA CCGTGGTCGA TGTTCATGAC CAGCGGATAG CCCGTCAGGA ACTGGCCGAA AGCGAAGCCC GTTTACGGAC CCTGTCTACC GAACTGGACT TGCAGGTGCA GCAGCGGACC CAGCAATTAC AGGCCTCTAT TCAGGATTTA CAGCGCTCGA ACGAGAACCT CGGGCAGTTT GCCTATGTGG CCTCTCACGA TTTGCAGGAG CCCCTGCGCA AGATTCAGCA ATTTGGGGAT CTGCTGAAAG AACAATATGC CGAAACGCTG GGCGGGGGCG TCAACTACCT CGACCGCATG CAGGCAGCCG CCTACCGAAT GTCGGTGCTT ATCCGGGATT TGCTGGCGTA TTCACGCATT TCTACCCGCC AGGAGGCTAA TCAGGCCGTC GACCTGAACA AGGTGGTCGA GTGGGCGCTG AGTGATCTGG AGCTTCGGAT AGCGGAAACC GGAGCCGAGA TTGAGGTCCA ATCGTTACCC CTGGTACTGG GCGACGCGTC GCAGTTAGGC CAACTCTTCC TGAACCTCCT GAGCAATGCC CTAAAGTTCC ATCGACCGGA TACCGTGCCT CGGATTCAGG TCCGTTTCCA AACGGTCGGG GCGGGTGCCC TGCCGGTTGG CATCACCCCC GCCCGGGCAG CTGCGGCCTA TCACCAGATT GAGGTCATCG ACAACGGCAT TGGTTTCGAA GGGAAGTACA TAGACCGTAT TTTTCAGGTG TTTCAGCGCC TGCAGGGAAA AAATCAGTAC GAGGGTACGG GCATTGGTTT AGCCATCTGC GAGAAGGTGG CGGCCAATCA TGGCGGAGCC ATTACCGCCA CGAGCCAGCC CGGTCAGGGA GCTACCTTCA GCGTCTATCT ACCCGCCTGA
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Protein sequence | MGALTRQYDW SKTSLGTPDH WPQSLRATLS IILNARFPMF LWWGSELIQF YNDAYRPSLD QNGKHPTALG QKGPDCWPET WSTIYPLIRQ VLDGEEAPWG EDQLIPIYRN GKLENTRWTF SYSPVKDESG KVAGVLVTCF ETTQKVQGFN RLQASEQRFQ QLVQKASVGI AVLSGPDLNI EIVNEAYAQL VGRRPDSLQG NRFFDVVPEA RPDLSPFIEH VKRTGECLYR YDHPYVSVVE GSKKEGYVNL TVQPYKEPDD TISGIILLCQ DVTGQVLSRQ DLEASEAKFR TLIEQAPVAT CLFVGPEMRI DLANESMITF FGQGPSIVGK PIREVLKRPV DTPAIQLLDN VFTTGKSFDA KEAPADLVIN GVPGTYYFDI SLKPLRNAAG EIYAVLEMAV EVTQEVLARK QRLESEAYFR RLTDAVPAIM WETQPDGYCT YLNKQWHETT GQTTDEAQGF GWLDATHPDD KAETSRVFLE ANQNQASFQA LYRLRQRDGQ YRWAIDLGSP RFAADGTYAG MIGTVVDVHD QRIARQELAE SEARLRTLST ELDLQVQQRT QQLQASIQDL QRSNENLGQF AYVASHDLQE PLRKIQQFGD LLKEQYAETL GGGVNYLDRM QAAAYRMSVL IRDLLAYSRI STRQEANQAV DLNKVVEWAL SDLELRIAET GAEIEVQSLP LVLGDASQLG QLFLNLLSNA LKFHRPDTVP RIQVRFQTVG AGALPVGITP ARAAAAYHQI EVIDNGIGFE GKYIDRIFQV FQRLQGKNQY EGTGIGLAIC EKVAANHGGA ITATSQPGQG ATFSVYLPA
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