Gene Slin_6598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6598 
Symbol 
ID8730384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8013626 
End bp8016055 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003391354 
Protein GI284041424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCGC TTACCCGACA GTATGACTGG TCAAAGACAT CACTGGGTAC ACCCGACCAC 
TGGCCGCAAA GCCTGCGGGC CACGTTGAGT ATTATTCTAA ACGCCCGGTT TCCCATGTTT
TTGTGGTGGG GATCGGAACT GATTCAGTTT TACAATGATG CTTACCGGCC CAGTTTAGAC
CAAAACGGTA AACATCCTAC TGCCCTCGGC CAGAAAGGAC CGGATTGCTG GCCGGAAACA
TGGTCGACTA TTTATCCCCT GATCAGGCAG GTATTGGACG GAGAAGAGGC CCCCTGGGGG
GAGGACCAGC TCATTCCCAT CTATCGGAAC GGAAAGCTTG AAAATACCCG CTGGACATTT
AGTTACAGTC CCGTTAAGGA TGAGTCCGGC AAGGTAGCAG GTGTGCTGGT TACCTGCTTC
GAAACTACCC AGAAAGTGCA GGGCTTCAAT CGACTGCAAG CCTCCGAGCA ACGTTTTCAG
CAACTGGTGC AAAAAGCGTC GGTAGGCATT GCTGTGCTGA GTGGCCCGGA CCTGAATATA
GAGATCGTTA ACGAGGCTTA TGCTCAACTC GTTGGGCGCC GTCCGGACAG CTTACAGGGA
AACCGCTTTT TCGATGTCGT TCCCGAAGCC CGGCCCGATC TCAGCCCCTT CATTGAGCAC
GTCAAGCGAA CCGGCGAATG CCTGTACCGC TACGATCACC CCTATGTTTC GGTCGTTGAG
GGATCGAAAA AGGAAGGTTA TGTAAATCTA ACCGTTCAGC CTTATAAGGA ACCGGACGAT
ACCATTAGCG GGATCATTCT GCTTTGCCAG GATGTGACCG GGCAGGTACT ATCCCGACAG
GATCTGGAAG CCAGTGAAGC CAAATTTCGC ACCCTCATCG AGCAGGCTCC CGTTGCTACC
TGCCTGTTCG TAGGTCCCGA AATGCGGATT GACCTTGCCA ATGAATCCAT GATCACCTTC
TTCGGGCAGG GTCCTTCCAT TGTGGGCAAA CCCATTCGGG AGGTGTTGAA AAGACCGGTA
GACACCCCAG CTATCCAGCT CCTGGATAAC GTATTTACTA CAGGTAAGTC ATTTGATGCC
AAGGAAGCAC CCGCCGATCT GGTTATCAAT GGCGTACCCG GAACCTACTA TTTTGACATT
AGTTTGAAGC CGTTGCGCAA TGCCGCTGGC GAAATCTATG CGGTGCTGGA AATGGCCGTT
GAGGTGACAC AGGAAGTGCT GGCCCGAAAA CAACGACTGG AAAGCGAAGC CTACTTTCGC
CGGTTGACGG ATGCCGTACC CGCCATTATG TGGGAAACGC AGCCCGACGG GTACTGCACC
TACCTCAACA AACAGTGGCA CGAAACCACC GGCCAGACTA CCGACGAAGC CCAGGGGTTT
GGCTGGCTCG ACGCTACCCA CCCCGACGAC AAGGCCGAAA CGAGTAGAGT CTTCCTTGAG
GCTAACCAGA ACCAGGCCTC CTTTCAGGCA CTCTACCGCT TACGCCAGCG CGATGGGCAG
TACCGCTGGG CAATTGACCT GGGTAGTCCC CGCTTTGCAG CAGATGGCAC CTATGCCGGG
ATGATTGGTA CCGTGGTCGA TGTTCATGAC CAGCGGATAG CCCGTCAGGA ACTGGCCGAA
AGCGAAGCCC GTTTACGGAC CCTGTCTACC GAACTGGACT TGCAGGTGCA GCAGCGGACC
CAGCAATTAC AGGCCTCTAT TCAGGATTTA CAGCGCTCGA ACGAGAACCT CGGGCAGTTT
GCCTATGTGG CCTCTCACGA TTTGCAGGAG CCCCTGCGCA AGATTCAGCA ATTTGGGGAT
CTGCTGAAAG AACAATATGC CGAAACGCTG GGCGGGGGCG TCAACTACCT CGACCGCATG
CAGGCAGCCG CCTACCGAAT GTCGGTGCTT ATCCGGGATT TGCTGGCGTA TTCACGCATT
TCTACCCGCC AGGAGGCTAA TCAGGCCGTC GACCTGAACA AGGTGGTCGA GTGGGCGCTG
AGTGATCTGG AGCTTCGGAT AGCGGAAACC GGAGCCGAGA TTGAGGTCCA ATCGTTACCC
CTGGTACTGG GCGACGCGTC GCAGTTAGGC CAACTCTTCC TGAACCTCCT GAGCAATGCC
CTAAAGTTCC ATCGACCGGA TACCGTGCCT CGGATTCAGG TCCGTTTCCA AACGGTCGGG
GCGGGTGCCC TGCCGGTTGG CATCACCCCC GCCCGGGCAG CTGCGGCCTA TCACCAGATT
GAGGTCATCG ACAACGGCAT TGGTTTCGAA GGGAAGTACA TAGACCGTAT TTTTCAGGTG
TTTCAGCGCC TGCAGGGAAA AAATCAGTAC GAGGGTACGG GCATTGGTTT AGCCATCTGC
GAGAAGGTGG CGGCCAATCA TGGCGGAGCC ATTACCGCCA CGAGCCAGCC CGGTCAGGGA
GCTACCTTCA GCGTCTATCT ACCCGCCTGA
 
Protein sequence
MGALTRQYDW SKTSLGTPDH WPQSLRATLS IILNARFPMF LWWGSELIQF YNDAYRPSLD 
QNGKHPTALG QKGPDCWPET WSTIYPLIRQ VLDGEEAPWG EDQLIPIYRN GKLENTRWTF
SYSPVKDESG KVAGVLVTCF ETTQKVQGFN RLQASEQRFQ QLVQKASVGI AVLSGPDLNI
EIVNEAYAQL VGRRPDSLQG NRFFDVVPEA RPDLSPFIEH VKRTGECLYR YDHPYVSVVE
GSKKEGYVNL TVQPYKEPDD TISGIILLCQ DVTGQVLSRQ DLEASEAKFR TLIEQAPVAT
CLFVGPEMRI DLANESMITF FGQGPSIVGK PIREVLKRPV DTPAIQLLDN VFTTGKSFDA
KEAPADLVIN GVPGTYYFDI SLKPLRNAAG EIYAVLEMAV EVTQEVLARK QRLESEAYFR
RLTDAVPAIM WETQPDGYCT YLNKQWHETT GQTTDEAQGF GWLDATHPDD KAETSRVFLE
ANQNQASFQA LYRLRQRDGQ YRWAIDLGSP RFAADGTYAG MIGTVVDVHD QRIARQELAE
SEARLRTLST ELDLQVQQRT QQLQASIQDL QRSNENLGQF AYVASHDLQE PLRKIQQFGD
LLKEQYAETL GGGVNYLDRM QAAAYRMSVL IRDLLAYSRI STRQEANQAV DLNKVVEWAL
SDLELRIAET GAEIEVQSLP LVLGDASQLG QLFLNLLSNA LKFHRPDTVP RIQVRFQTVG
AGALPVGITP ARAAAAYHQI EVIDNGIGFE GKYIDRIFQV FQRLQGKNQY EGTGIGLAIC
EKVAANHGGA ITATSQPGQG ATFSVYLPA