| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6590 |
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| Symbol | |
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| ID | 8730376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 8004196 |
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| End bp | 8005650 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003391346 |
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| Protein GI | 284041416 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.327029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGT CATTCATTCA TAAATCAACC CGAATCAGTT GTTATTTCGT AGCTGGCCTG
CTTCTGCTGA GCGGCTGTCA GGTACCCCGG CTCATGCAGC CCCCCAAGGC CCGGCAAACG
CCCGTTTCGT TCGTGGGCAG TGCAGATTCT GTCGGAATTG CCAGCCAGAA CTGGCGGCAG
TTCTTCGACG ACCCGAATCT GGTGCAGCTC ATCGACACGG CACTGGCCGG TAATCTGGAT
CTGCGCATTG CCACCCAGCG GATCGAAATG GCCAGAGCCT CCTTCGACTA CAGCCGGGGG
TTTCTGGCTC CACAAGTGAA CGCGGTGGGC TCGGCGGGAC TGGACCGGTA CGGGCAAACA
ACCCTGAATG GTGTGGGTAA CTTCGATACG AACCTGTCGG ATAATATTCG GGGCAATCTG
GTGATCCCCA ACCCCACTCC CGATTATTTT TTGGGTGCTC GCTCTACCTG GGAAATTGAC
ATCTGGGGCA AGCTTCGCAA CCGCAAAAAG GCCGCTTATG TCCGGTTTCT GGCTTCCGAA
AAAGGACGCC ATGCCGTTGT AACGAGTCTG GTAGCCGAAG TAGCCCGTTA TTACTATTCG
CTGCTGGCGC TGGACGGTGA GCAGGAGATC ATTCAAAAAA ATATTACCCT TCAGCAACGG
GCTCTTGACC TGGTTCGGAT TCAGAAACAG GCGGGACGGG TTACGGAGCT GGCCGTTCAG
CAATTTGCGG CCCAGCTTCT TAATACCCGC AGTCGGCAAA AACAGATTCA GCAGCAGATT
ATCGAAGCCG AAAACCAGTT GAACCGATTG ATGGGCCGGT ACCCGCAGGC CATCGTTCGC
GGAAAATCAC TTCAGGAGCG GGCATTACCC GGTCAGGTTC TCACGGGCCT ACCCGCCCGG
ATGCTCGCCC GCCGACCCGA TATCCGGCAG GCCGAACTCG AACTGGCAGC CGCCAACATC
GACGTGGAAG CCGTGCGGGC CGAGTTTTTA CCCAGCCTGA ACCTGTCGGC CTACGTGGGG
CTGAACTCCT TCCGGGCTGC ATCGCTGTTC AACCCGGCGT CGATTGCGGC TGGCATACTG
GGTGGCCTGG CGGGACCGGT CATTAACCGA CGTTTCGTAA AAGCCAACTA CCGGCAGTCC
GAAGCCCAGA GCCGGGAAGC CTTCTACCGC TACCAGCAAA CCATCGTAAC CGGCTTCGGC
GAAGTCGTTA CCAGTTTGCG GGGAGTCGAA AACTTCCGCT CCGTAGTGGA TCTACAGGAG
CAGGAAGTCG ATGTGCTCGA AAATGCCGTC GCCACGTCGA ACGACCTCTT TTCCAGCGGC
TATGCCTCCT ATCTGGAAGT CATTACGGCG CAACGCTCGG TGCTGGAAGC GGAACTGGCC
CTCATCAGCA CGAAGCAGTC GCAGTTTCTG TCGCTTACCG ACCTATACCG GGCGCTGGGC
GGTGGTTGGG AGTAA
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| Protein sequence | MEKSFIHKST RISCYFVAGL LLLSGCQVPR LMQPPKARQT PVSFVGSADS VGIASQNWRQ
FFDDPNLVQL IDTALAGNLD LRIATQRIEM ARASFDYSRG FLAPQVNAVG SAGLDRYGQT
TLNGVGNFDT NLSDNIRGNL VIPNPTPDYF LGARSTWEID IWGKLRNRKK AAYVRFLASE
KGRHAVVTSL VAEVARYYYS LLALDGEQEI IQKNITLQQR ALDLVRIQKQ AGRVTELAVQ
QFAAQLLNTR SRQKQIQQQI IEAENQLNRL MGRYPQAIVR GKSLQERALP GQVLTGLPAR
MLARRPDIRQ AELELAAANI DVEAVRAEFL PSLNLSAYVG LNSFRAASLF NPASIAAGIL
GGLAGPVINR RFVKANYRQS EAQSREAFYR YQQTIVTGFG EVVTSLRGVE NFRSVVDLQE
QEVDVLENAV ATSNDLFSSG YASYLEVITA QRSVLEAELA LISTKQSQFL SLTDLYRALG
GGWE
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