Gene Slin_6585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6585 
Symbol 
ID8730371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7996843 
End bp7997679 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content54% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003391341 
Protein GI284041411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATCG GAGTTGACTT AGGCGGAACC AATGTACGCG TTGGTCTGGT CGATAATGGT 
ATACTTGTTC GACAGCGCAG TATGGCGCTG GAACAAAAAG ACTCACTTCA AGCTACCCTG
GCGCAGCTTA TCGCGCTTAT CCAGCCCTTT GCGGACGATT CTGTAAACAG CATCGGCATT
GGGGTCCCAT CGGTGGTCGA TATTGACCGG GGGATTGTCT ATAATGTCGC CAACATCCCC
TCGTGGGAGG AAGTGGCCCT GCGCGATATT CTGGAAAAAG AGTTCGACCT TCCCGTTTTC
GTGAATAACG ATGTGAACTG CTTTATTCTC GGCGAGCATC AGTTTGGGCT GGCTAAAGGC
TACCGGTCGG CGGTGGGCAT GTCCATTGGA ACAGGGCTGG GGTCGGGCAT TATCATCGAC
AACCAGCTAT ATGCGGGCAG TAACTGCGGA GCGGGCGAAA TCGGGCTACT GCCGTACCTC
GACAAAAATA TCGAGTCGTA TGCGGCCACA CAGTTTTTCG AATCCATTCA CGGAACAACG
GCACTGGAGG CCAGTCTGTC GGCTACCCTC GGGGATAAAA ACGCGCTGAG CCTCTGGGAT
GATTTCGGAA AGCACTTCGG CGTGGCCGTA AAAACAGTGC TTTACACCTA CGACCCCGAA
GTGATTATCC TGGGTGGCTC CATTGCCAAG GCGTACCCAT TTTTCCGGGC GTCGATGTAC
GAAAGCATGG CCGACTTTGC GTATCCGGTT ACGCTACGTC GGCTACAGAT TTTCCAGTCC
CAGAACGAGA ACATCGCCCT GCTGGGCGCG GCTGCACTGG TGCGCCAACT GGTGTAG
 
Protein sequence
MTIGVDLGGT NVRVGLVDNG ILVRQRSMAL EQKDSLQATL AQLIALIQPF ADDSVNSIGI 
GVPSVVDIDR GIVYNVANIP SWEEVALRDI LEKEFDLPVF VNNDVNCFIL GEHQFGLAKG
YRSAVGMSIG TGLGSGIIID NQLYAGSNCG AGEIGLLPYL DKNIESYAAT QFFESIHGTT
ALEASLSATL GDKNALSLWD DFGKHFGVAV KTVLYTYDPE VIILGGSIAK AYPFFRASMY
ESMADFAYPV TLRRLQIFQS QNENIALLGA AALVRQLV