Gene Slin_6577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6577 
Symbol 
ID8730363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7985499 
End bp7986104 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content55% 
IMG OID 
Productthiamine monophosphate synthase 
Protein accessionYP_003391333 
Protein GI284041403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAA ATCCGTTTCT ACTACTGGGC ATAACCGATG GTAGCCCGCA AAGTCTGGCT 
ATACCAACGA TTCAGGCACT GCTGACCGGC GGTCTTGATT TTATGTACTG GCGAACGTCC
GCCGATAACG CCGGGTTAAC GCAACTTTCC GCTGGCTTTA AACCATCGGT ATTGCTGTCG
GCTACTAAAG GGAGCGCCGT ACCGGCATCG TTTCGCTGGC ATCTGAAAGA CGCGGATCGT
CAGGTTGCGA ACTTCGCAGA TGGACTCCCG TTTTCGACCA GTATTCATTC CCTCAGCGAG
TGGCCACGGC TAGCCGGACA GGTTGAGCTG GTCTTTTACA GTCCGCTTTT TCCCAGCATT
AGTAAACCGG GCTACGGGCC GTTGAGCAGT CTGGCGGTTA TCGAACAGCA GATTTCGGCG
ATTCGGCAAC AGCACACGGC CTTACCCCGG CTGATAGGAC TGGGAGGCAT ACAGGCCGAA
AATGTCGCCC TCGTTCGTGA AGCCGGTTTT GACGGGGCCG CGCTGATGGG CGCACTCTGG
CAAGCGCCCG ATGCCGTCGA CGCACTACAG CAAATCCGCG AAGTTCTTTC GGTTAAAGAC
GGTTAA
 
Protein sequence
MNKNPFLLLG ITDGSPQSLA IPTIQALLTG GLDFMYWRTS ADNAGLTQLS AGFKPSVLLS 
ATKGSAVPAS FRWHLKDADR QVANFADGLP FSTSIHSLSE WPRLAGQVEL VFYSPLFPSI
SKPGYGPLSS LAVIEQQISA IRQQHTALPR LIGLGGIQAE NVALVREAGF DGAALMGALW
QAPDAVDALQ QIREVLSVKD G