Gene Slin_6576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6576 
Symbol 
ID8730362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7984466 
End bp7985512 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content58% 
IMG OID 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003391332 
Protein GI284041402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATG GAGAACTGAA CCGATACAGC CGCCATATCA GCCTGCCCGA AATTGGTCTG 
GCAGGGCAGC AGCGATTAAA ACAGGCGCGG GTGGCCCTTG TGGGCGTGGG TGGCCTGGGC
TGCCCGGCGG GGCAATACCT GACGGCTGCG GGTATCGGTA CGCTGGGGAT CATAGACGGC
GACGTGGTGG AAGAAAGCAA CCTGCAGCGA CAGATTCTCT TTTCGCCCGA GCATATTGGC
CAGCCCAAAG CCACCGTAGC CGCTACGCTG CTGTCCCGGC AGAATCCGTA TAGTCAGGTG
GTTGCGCATC CGGTCTTTCT GACGAGTACC AACGCCCTGT CGATCCTGAG CGACTACGAC
ATCATTGTGG ATGGCTCGGA TAATTTTGCA ACGCGCTATC TGGTCAACGA TGCCTGCGTA
ATACTGAGGA AACCGCTGGT GTTCGGCTCT ATTTACAAGT TCGATGGGCA GGTGAGTGTG
TTCAACCATG CGGACGGCCC CACGTATCGG TGCCTGTACC CGGAACCCAG TGAGCTGGCT
GCCTGCGCCG AAGTGGGCGT ATTGGGTGTA TTGCCGGGCC TGACGGGCTG CCTGATGGCC
AGCGAAGTGA TTAAGCTGGT AACGGGCGTC GGGGACTTGC TGAGCGGTAC GCTGCTGGTT
TTCAACGCGC TTACCCTTTC CTTTAATACC TTTTCGTTTA CCGCTGATCC GGCCAACAAA
TTGATCTCGG CGCTTACTCC GTCGGCCCCC GACTGTGTTA TGCCCGTTCT GGAAATAACA
GCCTCGGACT GGCTGGCGCA GACCAATCGC CCCTTTTTAG TCGACGTGCG GGAGCCGCAA
GAGTACGAGC GCGAGAACCT GGGCGGGCAG TTGTTGCCCC TGGCCGAGCT GTACCAACAT
CCCGAGCGGG TGCCGAATGA TCAGCCGGTT GTTATTCATT GTCAGTCGGG GGCACGAAGT
CGGCAAGCCG TCGCTTTTTT GTTGACGAAA GGGTACCAGA ACGTGTTCAG TTTGCAGGGT
GGCCTGAACG CCCTTAACCG TCTTTAA
 
Protein sequence
MTNGELNRYS RHISLPEIGL AGQQRLKQAR VALVGVGGLG CPAGQYLTAA GIGTLGIIDG 
DVVEESNLQR QILFSPEHIG QPKATVAATL LSRQNPYSQV VAHPVFLTST NALSILSDYD
IIVDGSDNFA TRYLVNDACV ILRKPLVFGS IYKFDGQVSV FNHADGPTYR CLYPEPSELA
ACAEVGVLGV LPGLTGCLMA SEVIKLVTGV GDLLSGTLLV FNALTLSFNT FSFTADPANK
LISALTPSAP DCVMPVLEIT ASDWLAQTNR PFLVDVREPQ EYERENLGGQ LLPLAELYQH
PERVPNDQPV VIHCQSGARS RQAVAFLLTK GYQNVFSLQG GLNALNRL