Gene Slin_6574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6574 
Symbol 
ID8730360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7982557 
End bp7983336 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content57% 
IMG OID 
Productthiazole biosynthesis family protein 
Protein accessionYP_003391330 
Protein GI284041400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAC AATCGGTCAT GATTGCCGGT AAAACGTTTG GCTCGCGCCT GTTTACCGGA 
ACGGGCAAAT TCGGTTCGGC TCAACTTATG GAAGACGCCC TGCTGGCCTC GGGTACGGAA
CTGGTAACGG TGGCCCTCAA ACGGGTCGAC GCCACGAATC ACCAGGACGA TATGCTGTCT
TATCTGGCTC ACCCGCAGTT TAATCTGTTG CCCAATACAT CCGGTGTGCG AACGGCGAAA
GAGGCTGTCT TTGCGGCACA AATGGCCCGT GAAGCGTTGG AGACGAACTG GCTGAAGCTG
GAAATTCATC CCGACCCCAA ATACCTGCTG CCCGATCCCA TCGAAACGCT GAAAGCCGCC
GAAGAACTGG TTAAACTGGG TTTTGTGGTG TTGCCGTACA TCCATGCCGA TCCCGTGTTG
TGCAAGCGAC TGGAAGAGGT TGGGGTGGCG GCCGTAATGC CGCTGGGCGC TCCCATTGGT
ACGAACAAGG GACTGCGAAC GATTGATTTT CTGGAGATCA TCATTGAACA GAGCCGGGTG
CCAGTGGTGG TAGATGCCGG TTTGGGAGCG CCCTCTCATG CAGCCGCTGC TATGGAGTTG
GGGGCCGATG CCGTACTTGT CAACACAGCC ATTGCCGTTT CGGACGATCC GGTACGCATG
GCCGTTGCCT TTAAACTGGC TGTAGAAGCC GGTCGAATGG CCTATGAAGC GCGGCTGGCC
CGACCTTCCG TAACCGCCCA TGCCAGTAGC CCGCTCACCG CTTTTCTGGA CGAATTATGA
 
Protein sequence
MNTQSVMIAG KTFGSRLFTG TGKFGSAQLM EDALLASGTE LVTVALKRVD ATNHQDDMLS 
YLAHPQFNLL PNTSGVRTAK EAVFAAQMAR EALETNWLKL EIHPDPKYLL PDPIETLKAA
EELVKLGFVV LPYIHADPVL CKRLEEVGVA AVMPLGAPIG TNKGLRTIDF LEIIIEQSRV
PVVVDAGLGA PSHAAAAMEL GADAVLVNTA IAVSDDPVRM AVAFKLAVEA GRMAYEARLA
RPSVTAHASS PLTAFLDEL