Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6571 |
Symbol | |
ID | 8730357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7977159 |
End bp | 7981187 |
Gene Length | 4029 bp |
Protein Length | 1342 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Ig family protein |
Protein accession | YP_003391327 |
Protein GI | 284041397 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00409169 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTGCC GAATTTTTCT CCTCTTTTTT GCGATTTCGG TTGCCCTTTG CTCACTCAAA CCCGCTCTGG CTCAATCCAA ACGTCTTGTC CCGTTTACGT TCACGCTCTC CGGCGACAAG CGCACCAGTG CAGGTGTGTT TACCAAAGAT GGGGTTCTGA TTCGCACGCT CTGGAGCGGT GTCGATTTGA AATCCGGTTC CTACACCAAA TATTGGGATG GTCTCGATGA CGAAGGTCAG CCCGCTCCGT TAGCTTCGTA CGACATCAAA CTGATGTCGA ATAATGTAAG CTATACCTGG GAGGGGGTAA TTGGGAATTC GTCCTTTGGC AAAAGCCAGG GTAATGCCCT TCAACGTGGT TTTCTGCGGA TTCAGTCTAT GGCCGTTACG GGCAATACCG TCTACTACGG TGTAGGGTAT GCCGAAGGGA ATCCCTCTCA AGCTAAATTC AACGTCAGTG CGCCCCAGCA GCGAATCGAG TTTTCACCCA AAGGCAGTAC AGATCAGGCT ACTCTGTTTG TCGCTACGGA TGGTACTACG GTGTATTGGG CGGGTTACGA TGGCTATAAC AACGGCAACA ACTGGTTCAT CTATGGCACG AATACCAGCG ATAACGCCCA GCGGCAGTTT CCTTACGGCC AGTCGCAGAA GATGGTCATG GGTGGTACCT ACAGTTCATG TATCGATGTT ATAAACGACT CGCAGGGCAC CATAACGGGG CTAGCCGTGC AAAAACGGGG GCGCTTTTTG TTCGTGTCGC ACAAGGCCCG CCATCAGGTA CGGGTAATCG ACAAAGTTAG TGGGGCACAG GTACAAAGCC TGTTTTTCAA TGATGCCGCC GGTTTGGCAG TAGACCGGGA CGATAACCTG TGGGTTATCA ACGGAACAAC GGTGGGCAAG TTCAGCGTCC GGTCCGACGG TACGCTGTCC GATCCGCAAC TGATGCTGTC GGGTATAGAA GCTCCCATGG CACTGGCGGT ATCACCCGAT AACAGCACAG TACTCGTGGC CGATGGCGGA GCCAGCCAGC AGGTCAAGGC TTTCAATAAT CAGACGGGTG AAGCCGTCTG GCAGCTAGGT CAGCCGGGAG GGTATAGTTC AGACCCCAAC GTGAGCAATG ATAAATTTTA TTTCTCGGAT GTGAGTGGCG GTATTAACAG TACGTTTCTT GCGTATAATG AGGATGGTTC ATTCTGGGTG GGCGACTCGG GTAACTACCG GGCCCAGCAC TACTCGAGCA GCCGTACGTT TATTGATCGG ATTCAGTACA TGCAGAACAA CTACAGCTGT TATGTAGATC AGAACAATCC GCGTCGTGTG TTTGGTCAGT ATCTGGAATT TGCCATCGAC TACAATCAGC CCGTAGGTTC GGGCTGGACG CTGGTCAAGA ACTGGCGAGC CACAATTCCT GCCAGCTACT TCGAAAATCT GACCATCAAC CACATCTACA TCACCCATAT TTTTCGCGAT GTGGTGACAC TTTCCAACGG GCGGACATAC GGGTTTCTGC GTCGTTTTAC CGACAACAAG TGGGTACTGG TGGAGTTGCC CGCAACGGGT CCCGTTCGCA TGACCGGTAT CGCCTTCGAT ACGGACAACC GTTATACCTA TCACCTCTGT GCCGATGGCT CCCTGAAGCA GTCGATCGGT AACCTCAGCG GTACAACAGG AAACGTTAGC TGGCAAAATC GGCCATTGAC TGGCTTCGAC GGCAACAATG ATCCCATTTG GGGACCGGCC GTACCTTATA CTGTAGCGCC CATTGCCAGC GGGGGTGAGC CGATCACCTG GCAGGGCGGA CAGTCGAGAA CGGGCGAAAC TACCACATCG AATGTTATGG TTACGTTCGA TGCCGGTAAG GTCGACGGCG ACAAAGGGGG CGGGTACCAT TTGGGGGGTA TTCGGGTTAA CGACAACAAG TGGCTATGGA AAACCGCCCG CGCCACGTCG GTCGATTATC AGGGACCTTA TCCCATCGAC GGGGCCTACG ATGTAGGGAA CGACGTCGAG TACGGTGGGG GGGGCGTGAG CGTTTTCGAG CGAAATATTT TCTGGAATTA CCACGGTGAG TTCTGGAAAG ATACCCAGGT CAACAAATGG CAGCATGTGT ACGACAACGG CCTGCTACTG GGTATATTCG GAAAAACGGG GCTGGAGGCC CGGGTTGAAG CACCCGACGG AGGTCCCGTG CCGGGTATGG CCGGAAACGT TTACTATGGT ACGGTGATCA AGGCACCGAA CGGCAACGTG TACCTCTACC ATGGCGAAGA AGCGGGCTGG TCGGGTATAC ACCGCTGGCG GATAGACGGG CTCAATACCA TTCAGGAGCA AATGGTTTAC CTGCAACAGC TGGGTAACTA CGGATTCGGG GAAGAGCCGT TGGGAGTGGA GGGCGTCGAT CTGCTGAGCG GGCTGCCCCT GCGCGGAGTG GTTGCCGATA ATACCGCCGG ATGGAAACGA AATCCGGCGG GTGAATCCAA TACCGCGTAT AATGACAAAT GGACGGTGAA AACGGGCATC ATGAGCTACG ACCGTTTCAG CAGCCCCGAT CTATACACGA ACTTTTCCAA ATCGGGCGGC ATCTACACCG TAACCCGCGA CCTGGGCACC ACGGGCAGTT TGTCGAGCTG GAGCTTGAAA GGCGTTATTA CATTCAACGG TACTAACCCC AACAACGGCA CACCGGAGCA GTCTGATTCG GGCGGTAGTT ATTTTGAGGT ACTGGACAAC AACGGGAAGG TGCTGGCCCG AATCTTTAAC CAGGTATTTT TTGGTGAAAC CAATACGCCG GTGCGCCTGA TGGCAAACCG TCAGGTTATG GCGCAGGGAG AGTTTTTTAA CCCGGCCACT GCCACCGGAA CAACCTCTGA TGCCATCGAC ATAAGCATGT CTGGCGGAAT GCTGACGGTG AAATACGGCA ATTTTTCGCC TGTTACGGTA CCTGCTTTCG ATAACAGTGG TAATCTGCAA AACCCCAAAA CGGTTCGGCT GTTTTTCTGG AGCAATGGCC GGAATTACGA ACGAACCATC GACATCCAGC GGTTGCGTTT CTCGGCTGGT TCGGCAACCA GTTCTACGTC TTCGGCCCCC ACTGTGGCGA GCCCGCTGGC CGATCAGGTT GCTACTGTCG GGCAAAATCT GTCTTATACT TTCCCGGCTG GCAGCTTTGC TGATGCCGAT GGCGATAATT TGAGCTACTC CGCCAGTTTA TCGAGCGGGG CGGCCCTGCC CGGCTGGCTG ACCTTTAACG GATCGGGCCG CGCTTTTAGC GGGGTAGCTA CAACCAGCGG TTCGTTAACC ATTCGAGTAA CTGCAAGCGA CGGCCGGGGC GGACTGGCTG CCGATGACTT CAGCCTGACA GTCAATCCGG CACCCGTTTC CCAGCAGGCG GTGGTAAGCC TGAGTTTGAT GAATGCCGAT AACCAGCAGG AGATTAAAGT GCTTGCCGCC GGTGAGCAGC TTAACCTGGC TACGCTGCCT ACGCGTAACA TCAGTATCCG GGCCAACACC AATCCCGGTA CAGTCGGCAG TGTGAAGTTT TCCCTCAGTG GTGGCCGGAT TCATAGCATT GTCGAGTCGA TACTTCCTTA TGCCCTGTTT GGTGATAACA GCGGGAAATA CAACGGCTGG ACACCCGCCG TAGGGCAGTA TAGTCTGACG GCTACACCCT ATACGAACAG TGGGGCGAGC GGTACAGCCG GTACGGCGCT GACTATCAAC TTCTCGGTTA TCAATCAGGC CCCCGGCGGA CGTTTGGGTG CAACCGAGCC GCAGGAGTTG ACCGGCTTAC AGGTTACGTA CTATCCAAAT CCCTTTACCG AATCGTTTAC GGTACGGGTT CAGGGCCAAT CGTCGGCCAA ATTACCCTTG CTGATGTATG ACAGCTACGG CCGGGTGGTG TTGCAGCGGG ACGATCTAGC GCCTGAAGAG ATCATCAACG TAAGCAGCGG GTTTGCGCCG GGCGTGTACC TGCTTCAGGT AGGAACAGGC GCCGAAACCA AGCGATACAA GATCATCAAA GCGCAGTAA
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Protein sequence | MICRIFLLFF AISVALCSLK PALAQSKRLV PFTFTLSGDK RTSAGVFTKD GVLIRTLWSG VDLKSGSYTK YWDGLDDEGQ PAPLASYDIK LMSNNVSYTW EGVIGNSSFG KSQGNALQRG FLRIQSMAVT GNTVYYGVGY AEGNPSQAKF NVSAPQQRIE FSPKGSTDQA TLFVATDGTT VYWAGYDGYN NGNNWFIYGT NTSDNAQRQF PYGQSQKMVM GGTYSSCIDV INDSQGTITG LAVQKRGRFL FVSHKARHQV RVIDKVSGAQ VQSLFFNDAA GLAVDRDDNL WVINGTTVGK FSVRSDGTLS DPQLMLSGIE APMALAVSPD NSTVLVADGG ASQQVKAFNN QTGEAVWQLG QPGGYSSDPN VSNDKFYFSD VSGGINSTFL AYNEDGSFWV GDSGNYRAQH YSSSRTFIDR IQYMQNNYSC YVDQNNPRRV FGQYLEFAID YNQPVGSGWT LVKNWRATIP ASYFENLTIN HIYITHIFRD VVTLSNGRTY GFLRRFTDNK WVLVELPATG PVRMTGIAFD TDNRYTYHLC ADGSLKQSIG NLSGTTGNVS WQNRPLTGFD GNNDPIWGPA VPYTVAPIAS GGEPITWQGG QSRTGETTTS NVMVTFDAGK VDGDKGGGYH LGGIRVNDNK WLWKTARATS VDYQGPYPID GAYDVGNDVE YGGGGVSVFE RNIFWNYHGE FWKDTQVNKW QHVYDNGLLL GIFGKTGLEA RVEAPDGGPV PGMAGNVYYG TVIKAPNGNV YLYHGEEAGW SGIHRWRIDG LNTIQEQMVY LQQLGNYGFG EEPLGVEGVD LLSGLPLRGV VADNTAGWKR NPAGESNTAY NDKWTVKTGI MSYDRFSSPD LYTNFSKSGG IYTVTRDLGT TGSLSSWSLK GVITFNGTNP NNGTPEQSDS GGSYFEVLDN NGKVLARIFN QVFFGETNTP VRLMANRQVM AQGEFFNPAT ATGTTSDAID ISMSGGMLTV KYGNFSPVTV PAFDNSGNLQ NPKTVRLFFW SNGRNYERTI DIQRLRFSAG SATSSTSSAP TVASPLADQV ATVGQNLSYT FPAGSFADAD GDNLSYSASL SSGAALPGWL TFNGSGRAFS GVATTSGSLT IRVTASDGRG GLAADDFSLT VNPAPVSQQA VVSLSLMNAD NQQEIKVLAA GEQLNLATLP TRNISIRANT NPGTVGSVKF SLSGGRIHSI VESILPYALF GDNSGKYNGW TPAVGQYSLT ATPYTNSGAS GTAGTALTIN FSVINQAPGG RLGATEPQEL TGLQVTYYPN PFTESFTVRV QGQSSAKLPL LMYDSYGRVV LQRDDLAPEE IINVSSGFAP GVYLLQVGTG AETKRYKIIK AQ
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