Gene Slin_6569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6569 
Symbol 
ID8730355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7974692 
End bp7975408 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF1080 
Protein accessionYP_003391325 
Protein GI284041395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.301124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA AAAGCAAACA CATACGGCTC AGTTGGCTGG TCATCTGGAT GATGGTTTCA 
GCCTCAGTAT TCGCCCAGCA AGCCAATACG TTGACGCGTC AGGAGAAAAA AGACGGCTGG
GCGCTACTGT TCGACGGGGT CAGCACGGCT GGCTGGACTA CCTCCGGCGG CAAGCCGGTT
CCGGCTGGGT GGGTAGCCGA AAACGGGACG CTCACGGCCA AAAAAGGCGC CAAAGGGGGA
GATATCATTA CCGCCGGTGA ATACGCCGAC TTTGATCTGA AGTTCGACTA CAACATCGAA
ACGGCAGGTA ATAGCGGGGT CAAGTATTTC TATACGAACT ACCAAACGGG CGGCAAACTG
GGTATGGAGT ACCAACTGCT GGACGACAAA CTGGCCGAAG ACAACAAAAA GGAGAATCAC
CTCACGGGCT CCTTTTATGA TGCCATACCG CCCGATGCGT CGCGCAAAAA GGTGAATGAG
CCTGGTCAGT GGAATACTGT ACGTATCGTG TCCAAAGGCC GACAGGTCGA GCATTGGCTC
AATGGGGTCA AGATTCTGGA ATTTACGCGG GGTAGTGCGC CTTTCACGGA AGCCGTAGCG
TTGAGTAAAT TCAACAAGAC AGTACCTGCC TTCGGAACGG TCGAGAAAGG CCATATTCTC
TTGCAGGAGC ACGGGAGTGA AGTTTCATTC AGGAATATCA AAATCAAGGC GTTATAA
 
Protein sequence
MKRKSKHIRL SWLVIWMMVS ASVFAQQANT LTRQEKKDGW ALLFDGVSTA GWTTSGGKPV 
PAGWVAENGT LTAKKGAKGG DIITAGEYAD FDLKFDYNIE TAGNSGVKYF YTNYQTGGKL
GMEYQLLDDK LAEDNKKENH LTGSFYDAIP PDASRKKVNE PGQWNTVRIV SKGRQVEHWL
NGVKILEFTR GSAPFTEAVA LSKFNKTVPA FGTVEKGHIL LQEHGSEVSF RNIKIKAL