Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6569 |
Symbol | |
ID | 8730355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7974692 |
End bp | 7975408 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF1080 |
Protein accession | YP_003391325 |
Protein GI | 284041395 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.301124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA AAAGCAAACA CATACGGCTC AGTTGGCTGG TCATCTGGAT GATGGTTTCA GCCTCAGTAT TCGCCCAGCA AGCCAATACG TTGACGCGTC AGGAGAAAAA AGACGGCTGG GCGCTACTGT TCGACGGGGT CAGCACGGCT GGCTGGACTA CCTCCGGCGG CAAGCCGGTT CCGGCTGGGT GGGTAGCCGA AAACGGGACG CTCACGGCCA AAAAAGGCGC CAAAGGGGGA GATATCATTA CCGCCGGTGA ATACGCCGAC TTTGATCTGA AGTTCGACTA CAACATCGAA ACGGCAGGTA ATAGCGGGGT CAAGTATTTC TATACGAACT ACCAAACGGG CGGCAAACTG GGTATGGAGT ACCAACTGCT GGACGACAAA CTGGCCGAAG ACAACAAAAA GGAGAATCAC CTCACGGGCT CCTTTTATGA TGCCATACCG CCCGATGCGT CGCGCAAAAA GGTGAATGAG CCTGGTCAGT GGAATACTGT ACGTATCGTG TCCAAAGGCC GACAGGTCGA GCATTGGCTC AATGGGGTCA AGATTCTGGA ATTTACGCGG GGTAGTGCGC CTTTCACGGA AGCCGTAGCG TTGAGTAAAT TCAACAAGAC AGTACCTGCC TTCGGAACGG TCGAGAAAGG CCATATTCTC TTGCAGGAGC ACGGGAGTGA AGTTTCATTC AGGAATATCA AAATCAAGGC GTTATAA
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Protein sequence | MKRKSKHIRL SWLVIWMMVS ASVFAQQANT LTRQEKKDGW ALLFDGVSTA GWTTSGGKPV PAGWVAENGT LTAKKGAKGG DIITAGEYAD FDLKFDYNIE TAGNSGVKYF YTNYQTGGKL GMEYQLLDDK LAEDNKKENH LTGSFYDAIP PDASRKKVNE PGQWNTVRIV SKGRQVEHWL NGVKILEFTR GSAPFTEAVA LSKFNKTVPA FGTVEKGHIL LQEHGSEVSF RNIKIKAL
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