Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6567 |
Symbol | |
ID | 8730353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7969686 |
End bp | 7973153 |
Gene Length | 3468 bp |
Protein Length | 1155 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | TonB-dependent receptor plug |
Protein accession | YP_003391323 |
Protein GI | 284041393 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC CAATACCAGT TCAAACCCTG CTTTATTATA TGAAACTCTC GGTGGTACAG GTGTGTCTGG CCATAACGTT CACGGGTGTT TCGCTGGCAC TCGATGTTAC AGCTCAGGAG ATATTGACGA AACGGGTAAG CTTCCGGCTG GAAAATCAGG GCTTACGCAA GGTGTTTAAG GAAATCGAAC AGCAAACCAA CATTCGATTC GCCTTTCGGT CGCAGGTGAT TCCCTTCGAT CAGAAAACGA CCGTCATCGC GTCGAACGAA CCACTGGGTG ATGTGCTGAA CAAGGTGGTT AAACCGCTCC GGCTCCGCTA CGAAGTGGTA GGCCGTCAGA TCATCATCAG CCCTGTTTCC CAACCGGCCC AGCCGGAGGC TTCGCTGCAA CGTATCAACG GACGTACGGA TTTGTTGGCT GCGGCTGAGC AGACCATTAC GGGCACCGTA TCGGACGAAG CGGGCGTAAC CCTGCCGGGG GTAAGTGTGG TCATAAAAGG CACCACCCGC GGCACCTCCA CGGATGCCGA TGGCGCGTTT CGGCTCGTTG TGCCCGATGC CCAGGCAGTA CTGGTGTTTT CCTACGTTGG CTACGAGCCG CAGGAGGTGG GCGTTAGCAA CCAGACTTCT TTCAAAATCA CCTTGAAAGC CGATAGCAAA TCCCTCAACG AGGTGGTGGT CGTCGGCTAT GGTACGCAGA AAAAAGCCGA CCTCACCGGC GCTATCGCGA CCATATCGGC AGAGAAGCTA AAGAGCCGGC CCGCCGTGTC TTATGGCGAA GCGCTGGTGG GCCAAATGGC CGGGGTACAG GTGCAGCAAA CCAACGGCGC TCCCGGTGGC GAAGGGCTAA CGATTCGGGT GCGGGGTACA GGCTCTATTT CGGCTACCAG CTCGCCCCTT TATGTGATCG ACGGCTACCC GATTGACGGC AACGCGTTTT CGCTCGTAAA TCCGTCGGAT GTTGAAAGTA TTCAGGTGCT GAAAGATGCT TCGTCCACGG CCATTTACGG CTCGCGCGGG GCCAATGGTG TCGTGATCGT GACCACCAAG AAAGGGAGCG TTGGCACACC AACCATTTCT TACAATGCCT TTTACGGCAT TCAGCAGGTG GCGAAGAAAA TGAACGTCAT GAATACCCGC GAATACCTCC AGTTTTTCAA GGACGGTCAT AATCAGGCCT GGCTGGACCG GGCACCCATG CCCGGCGACG CACCCCACAC CATCAATGAC CCGAATTCTA TCCGGGAAAA ATATACCAAC TCCAGCTTCT ACGTTATTCC CGAAAGCTTT AACGATCCCA ACAACTTTGC GGACATCAAC TGGCAGGACC AGATTTTCCG GACAGCACCT ACCCAGCGGC ACGAGCTATC CGTAACGGGG GGCGTCGACA AAACGCGGTA TGCCGTGTCG GGTGGCTACA CCAACCAGCA GGGTATTCAG ATCAACAGCG ACTACAAACG GTATAATCTG CGCACCAACC TCACCTCCAA CCTGAGCAAA AAGCTGGAAG TGGGGGTGTC CATCAGCGGT TATTATTCGG AAAACAACAA TGTAGACAAC GGCAAAGACA GCCCCTTGTC CTACTCCGTC TACCTGCCCC CGATTTATCC CCTTCGCAAC CCCGATGGCA CGTACGGCTC GCAGGTACGC AACCCGGAAA TCTGGGCGGG CGACGTAGCC AACCCGGTTG GTATCGCTTC CGCTATTACG AACTACACCA GCCGCAACGG CTTCATTGCG TCGGCCTACG GTCAATACGA AATCATCGAC GGCCTGCGGT ACCGGATAAG CCTGAATGGC ACCATGGAGA ACCGGCGGCT GAAATACTAC CGTCCTTCGT ATGTGGATCT AGACGGCTCG CGGGCACCCC GAACGGCCGA CGCCCGCAAT GAAACCTGGC TCGACCGCAA CTGGCTGATC GAACACACGC TGAATTATAC CAGAACCCTG TTTACTAAAC ACAGCATCAA TCTGCTGGCG GGCTACACGG CCCAAAAGTC GTATGGCGAA TATGCGCGGG TCAATGCCCA GAACTTTCCC AACGATGTGG TGCGTACGCT GAGCGCGGGT CAGATCGTGG GCGGGACCAA TACGGAATAC CAGAACTCAC TGATTTCCTA TCTGGGCCGC TTCAACTATG CCTACGACGA TAAGTACCTG CTGACGGCCA GCATACGAAC CGACGGCTCG TCCCGCTTCG GGTCCAACAA CAAATGGGGT ACGTTCCCGT CGGTTTCGGC AGGGTGGCGG GTGAGCGGGG AGTCGTTCAT GCGCGACGTT CGCCCCATCA GCGACCTGAA AATTCGGGCT AGCTGGGGTC TGGTGGGTAA CAACCGCATC GGCGATTACG ACGCCATTGC CCGCACCGGC AACAGTTATA ACGTCCTTAA TAATACGCTG GTCAATTCGG TCGATCCGAT CAACTACCCC AACCCCGACC TCGGCTGGGA GAAAACCCGG CAGTGGAACA TCGGTTTTGA CTTGGGGCTG CTCAACGAAC GCATCCGGCT CGAAGCCGAC TTCTACAACA GCCGCTCCGT CGACCTGTTG CTCAGCGTTC CGGTTCCTAC GCTGACCGGC TACGCCACCC AGTTGCAGAA CATCGGCCAA CTGGAAAACA AGGGCATGGA ATACATGGTC CGGTCGCGCA ACCTGGTTGG CGCGTTCAAA TGGTCGACGG ATGCTAATAT CTCTTTCAAC AAGAATAAGG TACTGGCACT CGGTCCCGAC AAACGGCCTA TTTATGCCGG AGCAGCCAAT GCGGGCAATA CCTTTATTAC GACCATCGGG CAGCCCATTG CCACGTTTTT CGGCTATAAG TACGACGGTA TTTTCAAAAA TCAGGCCGAG CTGGATGCGG CTCCGCACCT GGCCAACGAC CACCCCGGCG ACCCACGGTA TGTCGATACA AACAAAGACG GGGTTATCAA TGCCGACGAT AAAACCTTTC TGGGAAACAA CCAGCCCAAT TTCATCTTTG GCTTTAGCAA TGATTTTTCC TACAAAGGCT TCGACCTCAA CCTCCAGCTG ACCGGTTCGC AGGGGGCCAA ACTGTTCAGC TTCTTTAACC GGATGGTGGG GATTTATCAT GGCGACCGCA ATGGGCTTGT TAAGTTAAAT GACCGCTGGC GTTCGGAAAC AGAGCCCGGC TCGGGCGATA TTCTGCGGGC CAACCGTGAT CCCAAAGGGC TGCAAAAAGA ACCGTCGAGC TACTGGGTGG AAGATGGCTC GTTTGTACGC ATCCGGAATG TATCCCTCGG CTATAATTTT AACAGTACCC TCCTCAAGCA GCTGCGGCTC AAAGGACTGC GTGTTTACGT AACGGGGCAG AATCTGTACA CCTTCACGAA GTATCCCGGT TTCGATCCGG AAACGAGCAG CGAAGGCGGC AGTCTGTCGC GCGGGGGGGA CTACCTGGGG TATCCGTCGG CCCGTACCCT CATTGCTGGT CTTAACGTAA CGTTCTAA
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Protein sequence | MKKPIPVQTL LYYMKLSVVQ VCLAITFTGV SLALDVTAQE ILTKRVSFRL ENQGLRKVFK EIEQQTNIRF AFRSQVIPFD QKTTVIASNE PLGDVLNKVV KPLRLRYEVV GRQIIISPVS QPAQPEASLQ RINGRTDLLA AAEQTITGTV SDEAGVTLPG VSVVIKGTTR GTSTDADGAF RLVVPDAQAV LVFSYVGYEP QEVGVSNQTS FKITLKADSK SLNEVVVVGY GTQKKADLTG AIATISAEKL KSRPAVSYGE ALVGQMAGVQ VQQTNGAPGG EGLTIRVRGT GSISATSSPL YVIDGYPIDG NAFSLVNPSD VESIQVLKDA SSTAIYGSRG ANGVVIVTTK KGSVGTPTIS YNAFYGIQQV AKKMNVMNTR EYLQFFKDGH NQAWLDRAPM PGDAPHTIND PNSIREKYTN SSFYVIPESF NDPNNFADIN WQDQIFRTAP TQRHELSVTG GVDKTRYAVS GGYTNQQGIQ INSDYKRYNL RTNLTSNLSK KLEVGVSISG YYSENNNVDN GKDSPLSYSV YLPPIYPLRN PDGTYGSQVR NPEIWAGDVA NPVGIASAIT NYTSRNGFIA SAYGQYEIID GLRYRISLNG TMENRRLKYY RPSYVDLDGS RAPRTADARN ETWLDRNWLI EHTLNYTRTL FTKHSINLLA GYTAQKSYGE YARVNAQNFP NDVVRTLSAG QIVGGTNTEY QNSLISYLGR FNYAYDDKYL LTASIRTDGS SRFGSNNKWG TFPSVSAGWR VSGESFMRDV RPISDLKIRA SWGLVGNNRI GDYDAIARTG NSYNVLNNTL VNSVDPINYP NPDLGWEKTR QWNIGFDLGL LNERIRLEAD FYNSRSVDLL LSVPVPTLTG YATQLQNIGQ LENKGMEYMV RSRNLVGAFK WSTDANISFN KNKVLALGPD KRPIYAGAAN AGNTFITTIG QPIATFFGYK YDGIFKNQAE LDAAPHLAND HPGDPRYVDT NKDGVINADD KTFLGNNQPN FIFGFSNDFS YKGFDLNLQL TGSQGAKLFS FFNRMVGIYH GDRNGLVKLN DRWRSETEPG SGDILRANRD PKGLQKEPSS YWVEDGSFVR IRNVSLGYNF NSTLLKQLRL KGLRVYVTGQ NLYTFTKYPG FDPETSSEGG SLSRGGDYLG YPSARTLIAG LNVTF
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