Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6565 |
Symbol | |
ID | 8730351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7967812 |
End bp | 7968402 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003391321 |
Protein GI | 284041391 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.658441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTATCTG CCCGTCCTCA TTCCGCCCTG TGGCACGCCT TTCGACAGGG GGACCGGGCG GCTTTTCAAC AGATTTACGG CTTGTACGCC CGCGATTTGC TCAATTACGG CTACAAGGTC ACCCGTGATG TGCCCCTCAT CGAAGACAGC ATTCACGATC TGTTCATCGA ACTCTGGCAA AGCCGGGCCA ATCTGAGCGA TACGGATTCC ATTCGATTTT ACTTATTCCG GTCCCTGCGC AACAAGATCA CCAAAACGCG CAATCGGGAT TTGTTCTTTC AGGCAGCTGA TATCAACGAC GCACCCACGG CGGTCGACGA CTTTATCATT GAAAATACCC TCATTGAAGG CGAAGAAGTC CAACGCATCA ATCAGCAGCT TCTCAAAAGT TTCGCCCTGC TCACACCCCG CCAGCAGGAG GCCCTGAACC TGCGCTTCTA CCAACATTTT AGCAACGAGG AAATTGCCCA GATCATGGGC GTCAATTACC AGTCGGCCTG CCGGTTCATC TACGCGGCCC TCAAGACGCT TCGCGAAGTT GTCCGCATCC TGAGTGTCGG TTTGTTGTGG GTGGGATTGG AGGGATTTTA A
|
Protein sequence | MLSARPHSAL WHAFRQGDRA AFQQIYGLYA RDLLNYGYKV TRDVPLIEDS IHDLFIELWQ SRANLSDTDS IRFYLFRSLR NKITKTRNRD LFFQAADIND APTAVDDFII ENTLIEGEEV QRINQQLLKS FALLTPRQQE ALNLRFYQHF SNEEIAQIMG VNYQSACRFI YAALKTLREV VRILSVGLLW VGLEGF
|
| |