Gene Slin_6565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6565 
Symbol 
ID8730351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7967812 
End bp7968402 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content53% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003391321 
Protein GI284041391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.658441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTATCTG CCCGTCCTCA TTCCGCCCTG TGGCACGCCT TTCGACAGGG GGACCGGGCG 
GCTTTTCAAC AGATTTACGG CTTGTACGCC CGCGATTTGC TCAATTACGG CTACAAGGTC
ACCCGTGATG TGCCCCTCAT CGAAGACAGC ATTCACGATC TGTTCATCGA ACTCTGGCAA
AGCCGGGCCA ATCTGAGCGA TACGGATTCC ATTCGATTTT ACTTATTCCG GTCCCTGCGC
AACAAGATCA CCAAAACGCG CAATCGGGAT TTGTTCTTTC AGGCAGCTGA TATCAACGAC
GCACCCACGG CGGTCGACGA CTTTATCATT GAAAATACCC TCATTGAAGG CGAAGAAGTC
CAACGCATCA ATCAGCAGCT TCTCAAAAGT TTCGCCCTGC TCACACCCCG CCAGCAGGAG
GCCCTGAACC TGCGCTTCTA CCAACATTTT AGCAACGAGG AAATTGCCCA GATCATGGGC
GTCAATTACC AGTCGGCCTG CCGGTTCATC TACGCGGCCC TCAAGACGCT TCGCGAAGTT
GTCCGCATCC TGAGTGTCGG TTTGTTGTGG GTGGGATTGG AGGGATTTTA A
 
Protein sequence
MLSARPHSAL WHAFRQGDRA AFQQIYGLYA RDLLNYGYKV TRDVPLIEDS IHDLFIELWQ 
SRANLSDTDS IRFYLFRSLR NKITKTRNRD LFFQAADIND APTAVDDFII ENTLIEGEEV
QRINQQLLKS FALLTPRQQE ALNLRFYQHF SNEEIAQIMG VNYQSACRFI YAALKTLREV
VRILSVGLLW VGLEGF